Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
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- Computational modeling of VEGF-A signaling predicts lymphatic junction state
- Drug-centric knowledge graph: representing therapeutic modality, pharmacology and multiscale biology
- SHAPPEing agent-based models to spatial data: Sequential Hooke's law Algorithm for Point Pattern reconstruction with Environmental constraints
- Experimental trophic flexibility guides a compartmentalized genome-scale model of red microalgae Galdieria sulphuraria
- Network-enabled drug repurposing identifies lithium to promote cardiomyocyte proliferation
- Dynamic flux balance analysis of cancer metabolism using expression-based human cell line models
- An agent-based model of wound healing in fibroblast scratch assays
- Polarization of regulatory inputs reveals structural constraints in reconstructed pathway-associated regulatory networks
- MAPKAP Kinase-2 signaling enhances the resolution of colonic inflammation through specialized pro-resolving mediators
- Does specific membrane surface area constrain Escherichia coli energy spillage and therefore aerobic and anaerobic growth rates?
- Reconstructing Dengue Exposure Dynamics and Assessing the Public Health Impact of Vaccination Scenarios Using Mathematical Models in Brazil
- Pickleball injuries, search interest, and participation in the United States, 2014-2023: an ecological time series study
- National incidence of coccidioidomycosis in the United States estimated through machine learning integration of epidemiological, veterinary, and socioecological data
- Mapping county-level tick-borne disease risk in Illinois by integrating vector abundance, pathogen prevalence, and phenology
- Vaccination and Non-School NPIs Shaped Ontario's Pre-Omicron COVID-19 Hospital Burden
- Epidemiologic shifts predict spatial patterns of measles re-emergence in the United States
- Municipality-level ecological analysis of COVID-19 mortality and infections in Austria, 2020 to 2023
- High-sensitivity C-reactive protein profiles differ between Korean and US adults with LDL cholesterol below 100 mg/dL
- Accuracy and completeness of death recording in primary care electronic health records compared with national death registrations in England using OpenSAFELY-TPP
- Intersectional Trajectories in Physical and Mental Health: A UK Longitudinal Study (2009-2024)
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- Mapping the combinatorial coding between olfactory receptors and perception with deep learning
- Multiobjective learning and design of bacteriophage specificity
- Synthetic tissue ecology: Ecological control of developmental self-organization across scales
- A diversified consortium of engineered biosensors enables multi-target quantification
- Interpretable biophysical neural networks of transcriptional activation domains separate roles of protein abundance and coactivator binding
- Learning dissipative chaotic dynamics with boundedness guarantees
- Taylor’s law beyond finite moments: A route to dynamic financial risk
- Generalized Taylor’s law for infinite-mean heavy-tailed data under dependence and heterogeneity
- Mathematical discovery and exploration can be done at scale
- Mantis: A foundation model for mechanistic disease forecasting
- Stationary analysis of adaptive aspiration dynamics in graph-structured games
- Life finds a way: Emergence of cooperative structures in adaptive threshold networks
- Dispersal asymmetry and dispersal distance shape dynamics and extinction risk in predator–prey metacommunities
- Impact of air pollutants and meteorological factors on the transmission rate of scarlet fever in China
- Echoes before collapse: Deep learning detection of flickering in complex systems
- Linking osmotic laxative exposure to effective gut microbial dynamics: A treatment-dependent Lotka-Volterra analysis
- Optimizing therapeutic protocols: insights from neural network analysis of fractional-order tumor models
- Individuality and the living tree of life: An information-geometric theory of biological form
- Optimal control of an SIR model with noncompliance as a social contagion
- Harvesting-driven dynamics in a modified Holling-Tanner model
- Weak dispersal and landscape size inevitably promote local biodiversity in heterogeneous metacommunities of competing species
- Ten simple rules for developing a reporting appraisal tool
- Computational deconvolution of drug sensitivity via single-cell–to–bulk transcriptome mapping
- Computation-through-Dynamics Toolkit: Simulated datasets and quality metrics for dynamical models of neural activity
- Leveraging spatial structure to design spatially-targeted malaria interventions at the community-scale
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- Next-generation metabolic models: From multi-constraint integration to AI-driven whole-cell kinetic simulation
- Unleashing the potential of whole-cell modelling one step at a time
- The evolution of standards in systems biology: From metabolic and multi-scale to whole-cell models
- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
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