Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Schema-based active inference supports rapid generalization of experience and frontal cortical coding of abstract structure
- SeekRBP: Leveraging Sequence-Structure Integration with Reinforcement Learning for Receptor-Binding Protein Identification
- Spiking neurons as predictive controllers of linear systems
- PRISM: Enhancing Protein Inverse Folding through Fine-Grained Retrieval on Structure-Sequence Multimodal Representations
- Central Dogma Transformer II: An AI Microscope for Understanding Cellular Regulatory Mechanisms
- D-MEM: Dopamine-Gated Agentic Memory via Reward Prediction Error Routing
- A multiscale discrete-to-continuum framework for structured population models
- Quantifying task-relevant representational similarity using decision variable correlation
- Geometric framework for biological evolution
- BCMI-Driven Motion Control Detection: EEG-Based Machine Learning and Interaction Entropy for High-Order Brain Networks
- A stress-function tradeoff organizes epithelial heterogeneity across spatial scales in the human thyroid
- Interactome mapping in human excitatory neurons reveals novel risk genes and pathways in Alzheimer's disease
- The Female Biomarker Challenge: Sex-Specific Network Robustness Constrains Biological Age Estimation and Geroscience Trial Design
- Alveolar-Basal Intermediates Drive Pulmonary Fibrosis via Coordination of a Pro-Fibrotic Signaling Niche in Silicosis
- 1100 Synthetic Benchmark Problems for Dynamic Modeling of Cellular Processes
- A high-throughput cost-efficient in vitro platform for the screening of immune senomodulators
- Detecting and Subtyping Ketoacidosis from Metabolomic Patterns in Forensic Casework
- A Network-Based Approach for Prioritizing Candidate Genes in Alzheimer's Disease
- Trans-acting Determinants of Gene Expression: Effects of Transcription Factor Affinity, Abundance, and Localization
- Mechanistic Modeling of Intrinsic Drug Resistance in Prostate Cancer Apoptosis Signaling
- THE PREVALENCE AND FACTORS ASSOCIATED WITH INTIMATE PARTNER VIOLENCE AMONG PREGNANT WOMEN IN TANZANIA: A CROSS-SECTIONAL ANALYSIS OF THE 2022 TANZANIA DEMOGRAPHIC AND HEALTH SURVEY AND MALARIA INDICATOR SURVEY (2022-TDHS-MIS)
- A job exposure matrix for occupational exposure to airborne micro and nanoplastics (PlastiXJEM(R)) and associations with respiratory outcomes
- Global comparison of influenza A and B epidemiology identifies consistent geographic and socio-demographic predictors
- One Health Longitudinal Study Protocol on Zoonotic and Vector-Borne Diseases in Battambang province, Cambodia: An Inter-Sectoral Approach
- Oral-Cardiovascular Links via Blood Biomarkers: An Exposure-Wide Analysis
- A Machine Learning Framework for Constructing Heterogeneous Contact Networks: Implications for Epidemic Modelling
- Frailty progression following severe infections in adults aged 65 years and above in US and England: two matched cohort studies
- The pitfalls of incidence-based time series regression for inferring the effects of weather on infectious diseases
- Hitchhiker bias distorts symptom-based surveillance of infectious diseases
- Bias and Variance of Adjusting for Instruments
- FineST: contrastive learning integrates histology and spatial transcriptomics for nuclei-resolved ligand-receptor analysis
- Illuminating cell states by a comprehensive and interpretable single cell foundation model
- Author Correction: Generalizable and scalable protein stability prediction with rewired protein generative models
- EPInformer: scalable and integrative prediction of gene expression from promoter-enhancer sequences with multimodal epigenomic profiles
- Optimizing global genomic surveillance for early detection of emerging SARS-CoV-2 variants
- Artificial intelligence for microbiology and microbiome research
- We wait for disease to shout—What if we listened when biology whispered?
- What problem do you hope bioengineering or synthetic biology approaches will enable us to tackle in the next decade?
- The hierarchical timescale hypothesis: Functional and structural convergence of biological networks and artificial neural nets
- Generative AI for synthetic biology: Designing biological parts, circuits, and genomes
- Stretch and flow at the gliovascular interface: High-fidelity modeling of astrocyte endfeet
- Mechanical compliance enhances the impulsive energy absorption of glassy polymer films
- Operator-level quantum acceleration of non-logconcave sampling
- Strategy evolution on temporal hypergraphs
- Scaling laws for function diversity and specialization across socioeconomic and biological complex systems
- Optimal control of Alzheimer’s disease model via multi-target combination therapy
- The evolution of cooperation in the division of labor on generalized networks with a single output
- Tumor Mutational Burden Shapes Success and Resistance in Cancer Immunotherapy
- An extensive study of two-node McCulloch-pitts networks
- Short-term Bayesian influenza forecasting in a hospital environment using a linear Kalman filter
- Persistence for a class of nonautonomous systems of differential equations with unbounded delays
- Dynamical analysis of a spatially heterogeneous disease model with degenerate structure
- The impact of migration-mediated multi-threshold control strategies on disease spread of a Filippov patch epidemic model
- Sensitivity and uncertainty analyses for model of olfaction using Dempster-Shafer theory and neural networks
- Stability and bifurcation of Mpox transmission model with population heterogeneity and booster vaccination
- iSTTC: A robust method for accurate estimation of intrinsic neural timescales from single-unit recordings
- Live and let die: Lysis time variability and resource limitation shape lytic bacteriophage fitness
- Fast hospital discharge rates blur within-hospital ‘transmission footprint’ in bacterial genomes, as showcased with Staphylococcus aureus
- Integrated multi-modal data analysis for computational modeling of healthy and location-dependent myocardial infarction conditions in porcine hearts
- Slow spatial migration can help eradicate cooperative antimicrobial resistance in time-varying environments
- In Silico Comparison of Rifampicin and 25-desacetyl Rifampicin-Induced PXR-Mediated CYP450 Transcriptional Response in 3D Primary Human Hepatocytes
- Format-Preserving Reduction of Canonical Nonlinear Models
- Platelet Adhesion and Aggregation Dynamics over Collagen- and VWF-coated Surfaces: Insights from Dissipative Particle Dynamics Simulations and Microfluidic Experiments
- SSRCA: A Novel Machine Learning Pipeline to Perform Sensitivity Analysis for Agent-Based Models
- Evolutionary Dynamics at the Leading Edge of Biological Invasions
- Feed has no items.
- Feed has no items.
- Primer: Drug discovery and patient-derived organoids: Primer: Innovative approaches for drug discovery
- Regime Shifts in Lakes: Observations, Models and Experiments
- Bridging Mechanism and Data: Hybrid Modeling Approaches for Cancer and Aging Research
- Regulatory out-of-equilibrium processes in cells. Part II: Spatial Heterogeneities and condensates
- Regulatory out-of-equilibrium processes in cells. Part I: Temporal Heterogeneities and Oscillations
- Extending a 1D Multi-Scale Plant Growth Model to Include Branching under Environmental and Soil Nutrient Dynamics
- Evolutionarily stable strategy in advective patchy environments
- Undesignable motifs in structural RNAs and combinatorial consequences
- Impact of network connectivity on the dynamics of populations in stream environments
- Mathematical modelling and analysis of unsteady poroelastohydrodynamics for an in-vivo type solid tumour