Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.

- OpenAIs HealthBench in Action: Evaluating an LLM-Based Medical Assistant on Realistic Clinical Queries
- Rapid quantitative chemical composition mapping using model-based MRI reconstruction with field inhomogeneity correction
- Geo-Somatic Resonance Theory: A Vibrational Framework for Sleep as Planetary Entrainment
- Reality Monitoring in Large Language Models: Self-Knowledge That Transforms with Conversation Memory
- Nonlinear Model Reduction of Complex Networks via Spectral Submanifolds
- Mathematical Model of Evolution of Non-Degenerate Replicator Systems
- Subject-Level Heterogeneity in EEG Motor Imagery Decoding: A Large-Scale Benchmark and Portfolio-Based Reduction of the Search Space
- TCellAlign: Cross-study T-cell Populations Alignment with Nomenclature-Guided Multi-Agent Workflow
- PPanGGOLiN V2: technical enhancement and extended functionalities for prokaryotic pangenome analysis
- Quantifying antiproliferative effects of quinolinic acid on melanoma, macrophage and keratinocyte cells using a parametric cell-viability model

- Beige/brown fat-mediated cardiac protection from high-fat diet is dependent on adipocyte beta3-adrenergic receptor
- Unlocking substrate specificities of human solute carrier proteins using untargeted metabolomics
- Cross-Species Efficacy of Combinatorial Gene Therapy for Osteoarthritis and Correction of Neuro-Inflammatory Pain Mechanisms
- Proteome-wide QTL mapping enables gene-protein-phenotype metabolic network construction in a genetically diverse MASLD mouse model
- A targeted plasma-proteomic axis separates autoimmune thyroid disease from growth-hormone deficiency
- Structural characterization of stochastic detailed balance in chemical reaction networks
- GreenSloth: a curated database and executable platform for mechanistic photosynthesis models
- Comparison of nuisance function construction strategies for double machine learning causal inference in single-cell transcriptomics: shared unsupervised deep learning does not require cross-fitting
- Network-scale disruption of RNA-protein interactions by a bioaccumulating small-molecule drug
- Kruppel-like factors KLF5 & KLF8 emerge as master transcriptional regulators of Alzheimers disease, as revealed on cell fate regulomes in human brain organoids

- County-Level Risk Mapping of Alpha-Gal Syndrome Using a Bayesian Proxy Approach
- Comparison of Influenza Vaccine Effectiveness Estimates Using Test-Negative Prospective Enrollment and Electronic Health Record Data, United States, 2024--2025
- Comparator supplement patterns qualify the clinical interpretation of an EHR-derived glucosamine signal in Alzheimer's disease
- Noise is the signal: variability in surveillance data provide early indication of epidemic phase
- Developing intrinsic capacity measures for research and practice in an Australian context
- Complexity of coupled behaviour-disease models and their relative performance against empirical data
- Cardiovascular Risk in BRCA1/2 Mutation Carriers: A Matched Cohort Study of Breast Cancer Survivors
- Risk-targeted interventions for measles control- Lessons from an emergency response project in the Katanga Region, Democratic Republic of the Congo (2021-2023)
- Surrogate Endpoint Evaluation with Causal Mediation: Lessons from the A4 Trial
- Importation risk and preparedness priorities across Africa in the 2026 Bundibugyo Ebola outbreak

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- Measurement accuracy in mechanobiology: A unifying statistical framework for testing cellular forces
- Hazard curvature makes within-host variability costly for survival
- Correction for Patel, The simplicity of the Hodge bundle
- Daring few, patient many: Division of labor in decentralized foraging collectives
- Modeling framework to demonstrate elimination of a vector population: Tsetse elimination in Chad

- Evolution of quantitative traits: Exploring the ecological, social and genetic bases of adaptive polymorphism
- Directed cell migration from protrusion-adhesion coupling under local chemotactic regulation
- Integrated tick management strategies in fragmented peridomestic environments
- The male-biased sex ratio in humans and its role in the transition from promiscuity to pair bonding
- Quantifying the counter-intuitive effects of vaccination by coupling the transmission dynamics of COVID-19 and the evolution of human behaviors

- Seasonal impacts on brucellosis transmission mediated by live sheep supply-demand dynamics
- Worker allocation between defence and non-defence tasks in social insect colonies: Thresholds and stable configurations
- Anticipating critical transitions in fear-mediated mutualistic ecological system: Effects of stochasticity and early warning signals
- Dynamics of discrete-time competition models with interspecific mating and reproductive interference
- Fire-driven tick-host dynamics and their impact on tick-borne disease spread

- Flexible navigation with neuromodulated cognitive maps
- Inward rectifier potassium channels interact with calcium channels to promote robust and physiological bistability
- Remembering the “when”: Hebbian memory models for the time of past events
- Quantitative analysis of massive SARS-CoV-2 testing in the community in France in 2021–2022 reveals the associations of variant, vaccination, and age with viral dynamics in symptomatic individuals
- ALFAssay: A feed‑forward neural network for quantitative fragmentomics‑based ctDNA profiling in breast cancer

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- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
- A dialog between cell adhesion and topology at the core of morphogenesis
- Computational models of cellular bioenergetics indicate the role of Ca2+-regulated pyruvate dehydrogenase in metabolic remodeling
- Dynamics of cell fate patterning in discrete multicellular systems

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