Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Language-model ratings of depression reflect the rater more than the patient
- From the Drosophila Visual Connectome to General-Purpose Computer Vision
- Information-Dense Synthesis for Molecular Discovery
- Beyond Scaffold Splits: Structural-Frontier Evaluation Reveals Hidden Failures in ADMET Models
- IMPPAT 3.0: An updated FAIR database of phytochemicals and formulations of Indian Medicinal plants
- How causal analysis can reveal autonomy in models of biological systems
- Speak to a Protein: An Interactive Multimodal Co-Scientist
- HRPv2: an automated and enhanced method for full-length homology-based R-gene prediction
- A Time-Resolved Framework for Quantifying Neuronal Network State Transitions
- Effects of Periodic Migration on Selection in Subdivided Populations
- Proteomes reflect size-based growth constraints across diverse microbes
- Measurement-Induced Decision Loss: A feasible-set theory of microbiome intervention under observation loss
- Unified Network Spectroscopy: Inferring Reduced Biological Dynamics from Fluctuations under Structured Noise and Broken Ergodicity
- Modeling aroma release during in vivo food oral processing using digimouth
- RI-SINDy: Regulation-Informed Sparse Model Discovery in Biological Gene Networks
- Impact of oxygen fluctuation and consumption on the dynamics of a reduced go-or-grow model for tumor cell invasion
- Monitoring the translation initiation process in prokaryotes via large-scale examination using optimized SSU-seq technique
- The Gαi/o GPCR LPAR2 Acts as a Non-Classical Factor for Aldosterone Induced Injury in a Cardiomyocyte Model
- digimouth: a Python package for modeling aroma release in food science
- Assay coverage reshapes metabolic diagnosis and the interpretation of pathway disturbance
- Seroprevalence and awareness of hepatitis C infection among informal workers at Kejetia Market, Ghana: A cross-sectional study
- Overdose-related communication in Connecticut: reported receipt, perceived utility, and responses among overdose prevention and response professionals
- Social and behavioral risk factors are associated with age-related differences in sustained attention: A cross-sectional GradCPT analysis of the All of Us dataset
- Menopause timing, hormone therapy, epigenetic aging, and breast cancer outcomes: a secondary analysis of the PLCO Cancer Screening Trial
- Predicting Cervical Cancer Screening Utilization Among Women of Reproductive Age in Ethiopia Using Supervised Machine Learning: A Nationally Representative 2024/25 EDHS Study
- Development and Evaluation of a Regional Health Information Exchange (HIE)-Based Platform for Population-Level Infectious Disease Surveillance
- Rural-urban differences in gut microbiome among Vietnamese women
- U-shaped effects of humidity and the impact of misspecified weather-transmission relationships in epidemic models
- Causal effects of body mass index on glycaemic traits in African and European populations: a Mendelian randomization study
- Role of heterogeneous infection histories on variant dynamics: exact and approximate approaches
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- Mapping the combinatorial coding between olfactory receptors and perception with deep learning
- Multiobjective learning and design of bacteriophage specificity
- Synthetic tissue ecology: Ecological control of developmental self-organization across scales
- A diversified consortium of engineered biosensors enables multi-target quantification
- Interpretable biophysical neural networks of transcriptional activation domains separate roles of protein abundance and coactivator binding
- Generalized Taylor’s law for infinite-mean heavy-tailed data under dependence and heterogeneity
- Mathematical discovery and exploration can be done at scale
- Mantis: A foundation model for mechanistic disease forecasting
- Large-scale semidefinite programming with graphics processing units
- Network topology creates independent control of multiple checkpoints in the cell cycle system
- Echoes before collapse: Deep learning detection of flickering in complex systems
- Utility-driven cooperation and emergent group diversity in the N-player Stag Hunt game: A framework relevant to collective biological behavior
- From neural propagation to conscious experience: A geometro-diffusion theory of consciousness
- Stochastic dynamics of an epidemic-behavior model
- Pillars of theoretical biology: Superspreading and the effect of individual variation on disease emergence
- Examining the impact of forcing function inputs on structural identifiability
- Optimising malaria and dengue case management through optimal diagnostic test allocation under budget constraints
- Revisiting Fulvestrant Dosing: Biomarker-Driven Mathematical PK/PD Modeling and Dosing Optimization in Estrogen Receptor–Positive Breast Cancer
- Trade-off between Allee remediation and disease transmission for adaptive survival: A mathematical model on Allee-exposed species
- Scalable branch-and-bound model selection with non-monotonic criteria including AIC, BIC and Mallows’s Cp
- DyME: An MD-based engine exploiting HTP mutagenesis for protein engineering and recognition mimicry
- A joint mixture Tobit method with latent microbial abundance improves detection of microbiome–disease associations in zero-inflated data
- Ten simple rules for preparing and delivering effective funding pitches in competitive grant applications
- A physiologically constrained calibration framework for cardiovascular models applied to a paediatric synthetic sepsis population
- HiFIseek: Gene-specific enrichment of high-impact mutations in associated genomic regions
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- Next-generation metabolic models: From multi-constraint integration to AI-driven whole-cell kinetic simulation
- Unleashing the potential of whole-cell modelling one step at a time
- The evolution of standards in systems biology: From metabolic and multi-scale to whole-cell models
- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
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