Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Preservation Constraints on aDNA Information Generation and the HSF Posterior Sourcing Framework: A First-Principles Critique of Conventional Methods
- Detecting outliers of pursuit eye movements: a preliminary analysis of autism spectrum disorder
- FLOWR.root: A flow matching based foundation model for joint multi-purpose structure-aware 3D ligand generation and affinity prediction
- Is normalized biomass really abundance? pitfalls, artifacts, and misconceptions in the field of size spectra analysis: a case for back-transformed spectra and standardized binning
- Interfacial Potential Transduction for Diagnostics
- BoolForge: Controlled Generation and Analysis of Boolean Functions and Networks
- UNGT: Ultrasound Nasogastric Tube Dataset for Medical Image Analysis
- Reward Engineering for Spatial Epidemic Simulations: A Reinforcement Learning Platform for Individual Behavioral Learning
- Analyzing animal movement using deep learning
- Modeling Spatiotemporal Neural Frames for High Resolution Brain Dynamic
- Pan-cancer proteogenomic interrogation of the Ubiquitin Proteasome System
- A metabolic model based on a pangenome core unveils new biochemical features of the phytopathogen Xylella fastidiosa
- Barcoding biology: Chemotype predicts variation in genotype, physiology, and stress response
- Agent-Based Modeling of Idiopathic Lung Fibrosis and Mechanistic Treatments
- Quantifying Treatment Resistance in Mixtures of Gastrointestinal Stromal Tumor Cells with BARMIX
- Proteomics for cultivated meat: the importance of Analytical Standardization
- Distributed elasticity: a high-reward, moderate-risk strategy for efficient control modulation in insect flight
- Systems-level longitudinal immune profiling reveals individualized immunotypes and genetic associations
- GlycoDiveR: a modular R framework to analyze and visualize highly dimensional glycoproteomics data
- Cross-Species Translation Enhances the Use of Mouse Models for Translatability and Drug Discovery in Late-Onset Alzheimer's Disease
- Prevalence of Non-communicable diseases among the pregnant women in selected three teagardens of Sreemongol Upazila in Moulvibazar district
- Influenza Antibody Levels Associated with Laboratory-Confirmed Influenza in a Test-Negative Study Design, US Flu VE Network, November 2018-May 2019
- Influenza vaccine effectiveness against outpatient acute respiratory illness with laboratory-confirmed influenza, United States, 2024-25 season
- Leveraging perturbations to infer the population dynamics of human rhinovirus and interaction of influenza A virus
- Beyond COVID-19 Deaths: Cause-Specific Analysis of Excess Mortality in Russia
- Wastewater-Based Genomic Surveillance of SARS-CoV-2 Variant Circulation in Two Informal Urban Settlements in Nairobi, Kenya
- Accelerated cancer registration from the National Disease Registration Service to support the NHS-Galleri trial
- Reallocation of 24-hour physical behaviour composition and mortality: exploring effect modification by sleep characteristics
- Heterogeneity in Lipoprotein(a) Profile Changes Across the Menopausal Transition
- Life Course Socioeconomic Position and health in older adulthood age: A Formal Mediation Analysis in the 1958 British Birth Cohort
- A computational mechanism linking momentary craving and decision-making in alcohol drinkers and cannabis users
- What does it take to learn the rules of RNA base pairing? A lot less than you may think
- An integrated germline and somatic genomic model for coronary artery disease
- Post-pandemic changes in population immunity have reduced the likelihood of emergence of zoonotic coronaviruses
- AI-based chest X-ray prioritization in the lung cancer diagnostic pathway: the LungIMPACT randomized controlled trial
- Antithetic integral feedback control redesigned for improved dynamics and lower noise
- Haplotype-resolved reconstruction and functional interrogation of cancer karyotypes
- Fast, long-range intercellular signal propagation through growth-assisted positive feedback
- Competition and compromise between exogenous probiotics and native microbiota
- Dynamics of genetic circuits in Pseudomonas protegens
- Global stability of ecological and evolutionary dynamics via equivalence
- On the optimal integration of intelligent agents into network systems to steer cooperation
- Stretch and flow at the gliovascular interface: High-fidelity modeling of astrocyte endfeet
- Mechanical compliance enhances the impulsive energy absorption of glassy polymer films
- Operator-level quantum acceleration of non-logconcave sampling
- Stochastic eco-evolutionary dynamics of multivariate traits: A framework for modeling population processes illustrated by the study of drifting -matrices
- Effects of insecticides and awareness on the dynamics of a delayed malaria model: A real-data calibration
- A computational study of adiposity-associated factors in the inflammatory process of osteoarthritis
- Editorial: Improving pandemic and epidemic responses - novel methods and lessons learned from previous infectious disease outbreaks
- Global metabolic coherence as a derived property of microbial communities: A discrete hodge framework
- Persistence for a class of nonautonomous systems of differential equations with unbounded delays
- How generalist predation shapes a predator-prey model: A bifurcation analysis
- Oncolytic viral therapy under type I interferon regulation: Mathematical modeling and analysis
- Stability analysis of a novel HIV model with CTL immune response, latency age, infection age and a saturated infection rate
- Genuine and spurious bistability in a simple epidemic model with waning immunity
- Physical models of embryonic epithelial healing
- Overcoming extrapolation challenges of deep learning by incorporating physics in protein sequence-function modeling
- Rules railroad: Syntax-inspired diagrams for visualizing and understanding rule-based model specifications
- HiCMamba: Enhancing Hi-C resolution and identifying 3D genome structures with state space modeling
- MPCI: A novel metric for quantifying DNA methylation patterns in NGS data
- The Role of Viral Dynamics and Infectivity in Models of Oncolytic Virotherapy for Tumours with Different Motility
- Integrating Mechanistic Modeling and Machine Learning to Study CD4+/CD8+ CAR-T Cell Dynamics with Tumor Antigen Regulation
- Emergence of Bursting and Delay-Induced Spiral Patterns in Eco-Epidemiological Systems
- Modelling and Simulation of Collective Cell Migration with Non-Local Interactions on Time-Dependent Spatial Domains
- Final-Size Solutions for SIRI Models with Vaccination
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- Simple systems, complex dynamics: lessons from minimal gene regulatory networks
- Toward a systems view of life’s origins: Modeling the emergence of complexity across chemical, informational and ecological levels
- Intercellular coupling and synchronization of circadian clocks: Theoretical insights and experimental perspectives
- Carleman-linearized epidemic models as a route to a data-driven algebraic estimate of the effective reproduction number
- Understanding the temperature response of biological systems: Part II - Network-level mechanisms and emergent dynamics
- Mathematical dissection of tumor phenotypic heterogeneity in a spatial data-informed nonlocal reaction-diffusion model
- Order-Dependent dissimilarity measures on phylogenetic trees
- Rate-induced tipping in a lake eutrophication model coupled with human activities
- Derivations of animal movement models with accumulated memory
- Extending a 1D Multi-Scale Plant Growth Model to Include Branching under Environmental and Soil Nutrient Dynamics