Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.

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- 13C-Metabolic Flux Analysis of Substrate Co-Metabolism in the Methylotrophic Acetogen Eubacterium limosum.
- Comprehensive calculation of product and ATP yields for glucose fermentation
- Unifying N- and O-glycopeptide dissociation methods with expedient electron transfer dissociation
- In Vivo Transcriptomics-Based Framework for Systematic Indication Expansion
- An epigenetic palimpsest: the King penguin's blood methylome reveals conserved hematopoietic ageing
- Common cis-eQTLs do not explain chromosome 21 expression deviations from the ploidy expectation in Down syndrome
- A mathematical model of tumor growth driven by oxygen lactate exosome feedback
- Linking H3K36me3 to transcriptional dynamics
- Systemic control and inter-organ communication of ovarian aging
- When can site-specific glycoform compositions resolve biosynthetic rates?

- Language eligibility criteria and enrolled racial and ethnic composition in US clinical trials: a cross-sectional study
- Visit-to-Visit Blood Pressure Variability, Glycemic Status and the Risk of Dementia, Stroke, and All-Cause Mortality: A UK Biobank Cohort Study
- Patterns and correlates of alcohol and other substance use among adults in two communities in Cape Town: a cross-sectional
- Development and Validation of a Sleep Disorder Risk Prediction Model in Young and Middle-Aged Adults With Anemia
- Approach to some data preparation problems in systematic review and meta-analysis
- Does handgrip strength improve cardiometabolic risk stratification beyond detailed body composition? NHANES 2011-2014 with temporal validation
- EpiAlert: A Transparent CUSUM-EWMA Framework for Early Warning of Unusual Influenza-Like Illness Surveillance Activity
- Dynamics of a slow-burn epidemic: the genomic epidemiology of poultry-associated Campylobacter jejuni ST474 in New Zealand
- MID-LIFE LEISURE-TIME PHYSICAL ACTIVITY IS ASSOCIATED WITH LOWER HIP FRACTURE RISK IN UK BIOBANK
- Quantifying Systematic Bias in Observational Causal Estimates Using Negative Controls: The Bias Attribution Fraction

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- Mapping the combinatorial coding between olfactory receptors and perception with deep learning
- Multiobjective learning and design of bacteriophage specificity
- Synthetic tissue ecology: Ecological control of developmental self-organization across scales
- A diversified consortium of engineered biosensors enables multi-target quantification
- Interpretable biophysical neural networks of transcriptional activation domains separate roles of protein abundance and coactivator binding

- Learning dissipative chaotic dynamics with boundedness guarantees
- Taylor’s law beyond finite moments: A route to dynamic financial risk
- Generalized Taylor’s law for infinite-mean heavy-tailed data under dependence and heterogeneity
- Mathematical discovery and exploration can be done at scale
- Mantis: A foundation model for mechanistic disease forecasting

- Impact of air pollutants and meteorological factors on the transmission rate of scarlet fever in China
- Echoes before collapse: Deep learning detection of flickering in complex systems
- Utility-driven cooperation and emergent group diversity in the N-player Stag Hunt game: A framework relevant to collective biological behavior
- From neural propagation to conscious experience: A geometro-diffusion theory of consciousness
- Stochastic dynamics of an epidemic-behavior model

- Optimal control of an SIR model with noncompliance as a social contagion
- Harvesting-driven dynamics in a modified Holling-Tanner model
- Regulating brucellosis network dynamics via clustering: Multistability, protective intervals and transient oscillations
- Examining the impact of forcing function inputs on structural identifiability
- Optimising malaria and dengue case management through optimal diagnostic test allocation under budget constraints

- MEGH-DDI: MolT5-driven edge-aware graph learning with Hop2Token representation for drug–drug interaction prediction
- How compartmentalization and proliferation shape the splenic T cell repertoire during an immune response to a complex antigen in mice
- Going around phase defects: Addressing a fundamental flaw of phase singularity detection
- Forecasting of infectious disease epidemics in sexual networks using attenuated renewal processes
- DipSkmer: Reference-free population genomics with diploid genome skims

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- Next-generation metabolic models: From multi-constraint integration to AI-driven whole-cell kinetic simulation
- Unleashing the potential of whole-cell modelling one step at a time
- The evolution of standards in systems biology: From metabolic and multi-scale to whole-cell models
- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling

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