Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Stability and Wandering of Bumps in Neural Fields with Interneuron Subtypes
- Cross-Domain Transfer of Depression Voice Biomarkers Depends on the Outcome Instrument: Leakage-Controlled Cross-Sectional Evaluation Study
- HypoKG: Evidence-Disciplined Biomedical Hypothesis Generation Beyond Endpoint Knowledge
- Same Encoder, Different Winner: A Paired-View Framework for Cell Painting Encoder Evaluation
- Statistical Mechanics of Semantic Compression
- PyFLI: A unified Python framework for fluorescence lifetime imaging data generation, parameter estimation, and benchmarking
- Making Models That Matter: How to Build Trustworthy and Useful Systems Biology Models
- Diffusion learning reveals viable parameter manifolds and compensation geometry in biological dynamical systems
- Audiovisual diarization of overlapping click trains in sperm whale (Physeter macrocephalus) vocal sparring using a three-hydrophone array
- Perturbational Validity for Foundation Models of Brain Dynamics: A Controlled Proof-of-Principle Simulation
- Site-resolved spatial and structural interactome of a human cell
- Competing constraints on protein availability and nutrient uptake reshape yeast genetic interactions
- DiffDose: Differentiable Programming for Personalized Dose-Regimen Optimal Control
- A single-cell view of human tissue aging reveals architectural decline beyond cellular composition
- A transitional senescence program drives inflammatory monocyte state expansion in aging humans
- Agentic-AI-ready genome-wide poxvirus-host interaction screen refined by a protein language model
- Nonlinear regime transitions enable reservoir computation in activator-inhibitor cellular automata
- A panel of Diversity Outbred mouse embryonic stem cells: enabling the functional characterization of natural genetic variation in vitro
- The Principal Component Life Trajectory (PCLT): Mapping Sex-Specific Physiological Change Across the Human Lifespan
- Data-driven multiscale modeling deciphers MOI-dependent dual antiviral mechanisms of OP7
- Estimated cardiorespiratory fitness and incident cardiometabolic multimorbidity: findings from three nationally representative cohorts
- Decision Analysis Modeling Favors Optimal Influenza Vaccination in Late November or Early December
- Testing the feasibility of a national respiratory swabbing tool in FluSurvey to support pandemic preparedness in England, 2025-26
- Assessing and refining a metabolite-based distress score for use in different populations within three US cohorts
- Trends in Lyme disease incidence in England, 2013 to 2024
- A gut microbiome-derived risk score is associated with future cancer development
- Clonal Haematopoiesis Tracks Alzheimer's-like Cortical Atrophy in Community-Dwelling Older Adults
- Molecular epidemiology of respiratory syncytial virus infections in Arizona, USA during the 2023-24 and 2024-25 seasons.
- Regional and sex differences in the contribution of smoking-related mortality to changes in adult life expectancy in Brazil, 2000-23
- Healthy vaccinee effect in SARS-CoV-2 vaccinees without documented infection
- Feed has no items.
- Mechanical feedback drives fractal airway organization
- Beyond differential expression: Differential variability as an underappreciated axis in transcriptomics
- The emergence of the fractal bronchial tree
- High-throughput DNA engineering by mating bacteria
- A data-driven modeling framework for mapping genotypes to synthetic microbial community functions
- Correction for Zhang et al., Reconstructing the early spatial spread of pandemic respiratory viruses in the United States
- Uncovering dynamic human brain phase coherence networks
- Stochasticity and probabilistic trajectory scoring are essential for data-driven closures of chaotic systems
- Group size effects and collective misalignment in LLM multi-agent systems
- Many-eyes and sentinels in selfish and cooperative groups
- A theoretical model for optimal fluid maintenance in clinical dengue patients
- Mechanisms accounting for Allee effects during HIV-1 infection
- Bridging two theoretical frameworks of autocatalysis: RAF sets and stoichiometric autocatalysis
- A stochastic agent-based model for naive CD8+ T cell recirculation dynamics in mice
- A revised ribosome–antibiotic model with proportional feedback synthesis explains recovery from translation inhibition
- Modeling tumor-immune interactions with hyper-allee effects: Formulation, stability, and bifurcation analysis
- Mutant p53 gain-of-function and immune suppression: Mathematical modeling of STING–TBK1–IRF3 axis restoration for enhanced cancer therapy
- Threshold dynamics of the hydra and hormetic effects in a discrete population model
- Parametric sensitivities of a nonsmooth Wilson-Cowan model with a comparison to its smooth counterpart
- Permanent charge effects on current-voltage relations via classical Poisson-Nernst-Planck systems under relaxed electroneutrality boundary conditions
- Correction: Screening of core targets for Di(2-ethylhexyl) Phthalate-related gastric cancer based on machine learning, molecular docking, and SHAP analysis
- Ecological specialization in vectors alters transmission thresholds and endemic dynamics in multi-host, multi-vector systems
- Leveraging perturbations to infer the population dynamics of human rhinovirus and interaction of influenza A virus
- Analysis of multicellular anatomical structures from spatial omics data using sosta
- AET5: A transcriptome-guided molecular generation framework with contrastive self-supervised learning
- Feed has no items.
- Feed has no items.
- Feed has no items.
- The evolution of standards in systems biology: From metabolic and multi-scale to whole-cell models
- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
- Amniote gastrulation in silico
- A dialog between cell adhesion and topology at the core of morphogenesis
- Feed has no items.