Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
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- Multi-omics profiling identifies a metabolic and energetic signature associated with neuronal dENL/AF9 suppression in aged flies
- Population reweighting and reporter distortion obscure ribosome regulation during translation inhibition
- Integrating CSF and EV Proteomes Enhances Biomarker Discovery by Capturing Shared Variation Across Compartments
- A global signature of microbiome resilience to climate stress
- A kinetic-aware approach to infer metabolic variations and flux using transcriptomics and metabolomics data
- From seven combination hypotheses to one testable interaction: a gated agentic AI QSP workflow applied to healthy ageing interventions
- Dynamical stability and accuracy of moment closure approximations for bursty gene expression with nonlinear degradation
- Reducing growth-medium complexity reveals nutrient-responsive programs in a near-minimal bacterium
- Cyclic uremia without kidney injury drives cardiovascular disease with rapid onset of immunosenescence and heart failure
- Stress-recovery dynamics reveal a separatrix in transcriptomic landscapes across organs and aging
- Population-Based Prevalence of Overweight and Obesity in German Youth: Findings from MoMo 2.0 and Comparison with KiGGS
- Comparative immunogenicity and relative vaccine efficacy of recombinant and cell culture-based influenza vaccines: Results from a randomized trial of adults in the United States, 2024-2025
- NMR metabolomics for cardiovascular-kidney-metabolic risk stratification in an integrated healthcare system
- Temporal Trends in Antimicrobial Resistance Among Clinically Important Pathogens in Iraq, 2021-2024: Implications for Empirical Antimicrobial Therapy
- Maternal Cigarette Smoking Trajectories and Risk of Low Birthweight in the United States: A Population-Based Analysis of 2023 to 2024 Natality Data
- Large-scale modelling of β-thalassaemia carrier prevalence: geostatistical predictions and population estimates from a global evidence base
- Growth trajectories and risk of underweight and overweight in childhood cancer patients and survivors: a longitudinal multicentre cohort study protocol
- A WHO CNS5-Aligned Classification Framework for Population-Based Surveillance of Brain and Other Central Nervous System Tumors in the United States
- Occupational endotoxin exposure, DNA methylation changes, and immune-cell remodeling: an epigenome-wide association study in two cohorts
- Potential impact of changes in influenza vaccination coverage and effectiveness on pediatric influenza burden in the United States, 2022/23-2024/25
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- Mapping the combinatorial coding between olfactory receptors and perception with deep learning
- Multiobjective learning and design of bacteriophage specificity
- Synthetic tissue ecology: Ecological control of developmental self-organization across scales
- A diversified consortium of engineered biosensors enables multi-target quantification
- Interpretable biophysical neural networks of transcriptional activation domains separate roles of protein abundance and coactivator binding
- Generalized Taylor’s law for infinite-mean heavy-tailed data under dependence and heterogeneity
- Mathematical discovery and exploration can be done at scale
- Mantis: A foundation model for mechanistic disease forecasting
- Large-scale semidefinite programming with graphics processing units
- Network topology creates independent control of multiple checkpoints in the cell cycle system
- Echoes before collapse: Deep learning detection of flickering in complex systems
- Utility-driven cooperation and emergent group diversity in the N-player Stag Hunt game: A framework relevant to collective biological behavior
- From neural propagation to conscious experience: A geometro-diffusion theory of consciousness
- Stochastic dynamics of an epidemic-behavior model
- Pillars of theoretical biology: Superspreading and the effect of individual variation on disease emergence
- Revisiting Fulvestrant Dosing: Biomarker-Driven Mathematical PK/PD Modeling and Dosing Optimization in Estrogen Receptor–Positive Breast Cancer
- Trade-off between Allee remediation and disease transmission for adaptive survival: A mathematical model on Allee-exposed species
- Scalable branch-and-bound model selection with non-monotonic criteria including AIC, BIC and Mallows’s Cp
- Optimal control of dengue under vaccine heterogeneity: From dynamical analysis to dynamic strategy optimization
- Transition-pair structure and near-extremal third-position transition robustness in the standard genetic code
- Demographic changes and behavioural responses shape vulnerability to infectious disease outbreaks
- Effects of spatial constraints of inhibitory connectivity on the dynamical development of criticality in spiking networks
- GeoEPred: A multimodal structure-aware geometric deep learning framework for Gram-negative bacterial secreted effector prediction with sequence semantics
- PEtab Select: Specification standard and supporting software for automated model selection
- Context-dependent feature modulation shapes human decision policies in approach–avoidance conflicts
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- Next-generation metabolic models: From multi-constraint integration to AI-driven whole-cell kinetic simulation
- Unleashing the potential of whole-cell modelling one step at a time
- The evolution of standards in systems biology: From metabolic and multi-scale to whole-cell models
- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
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