Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Positive Alignment: Artificial Intelligence for Human Flourishing
- Susceptible-Infected-Susceptible Model with Mitigation on Scale-Free Networks
- Direct From Darwin: Deriving Advanced Optimizers From Evolutionary First Principles
- Encoding and Decoding Temporal Signals with Spiking Bandpass Wavelets
- The Homological Brain: Parity Principle and Amortized Inference
- Relational reasoning and inductive bias in transformers and large language models
- Joint sparse coding and temporal dynamics support context reconfiguration
- Modulating task outcome value to mitigate real-world procrastination via noninvasive brain stimulation
- TD3B: Transition-Directed Discrete Diffusion for Allosteric Binder Generation
- Yeti: A compact protein structure tokenizer for reconstruction and multi-modal generation
- Learning activator-inhibitor dynamics at the cell cortex with neural likelihood ratio estimation
- Talk2QSP: Deriving Executable Scenarios from Unstructured Literature via Human-in-the-Loop Agents
- Homeostatic feedback model of energy metabolism with adaptive enzyme levels exhibits problem solving behavior
- Susagi: A Microbiome World Model
- Unraveling the metabolic interactions of a Dehalobacter-containinganaerobic mixed culture for bioremediation
- Computational analysis reveals the requirement for cell-cell interaction in liver repopulation by transplanted hepatocytes
- Systemic stress states are reversed by NPBWR1 inhibition
- COCOA.jl: A Julia package for high-performance analysis of concordance and kinetic modules in biochemical networks
- Acetate promotes nutritional adaptation in Escherichia coli
- A unified framework links infant vulnerability with aging-related mortality dynamics
- Retinal Vasculature, Plasma Metabolites and Cardiovascular Disease Risk: A Prospective Cohort Study from the Canadian Longitudinal Study on Aging
- Decoding the diet-gut-liver axis: links between dietary pattern adherence, gut microbiome, and hepatic health
- Psychosocial mediators for the impact of personal genomic risk information on melanoma prevention and early detection behaviors
- SARS CoV 2 Associated Shifts in the Upper Respiratory Tract Mycobiome in Non Hospitalized Cases
- Outdoor attractive targeted sugar bait Phase III trials for malaria control in Kenya, Mali, and Zambia: An individual participant data meta-analysis
- SEIR-IoT cyber-physical architecture with dual parametric coupling for epidemic scenario simulation using synthetic biomedical signals
- A literature scanning and prioritization framework to guide future systematic reviews for World Cancer Research Fund International's Global Cancer Update Programme
- Simpler is not always better: Phylodynamic misspecification and deep-learning corrections
- Biomarker Panel Selection Explains Heterogeneity in Allostatic Load-Mortality Risk: A Specification-Curve Analysis
- Transdisciplinary Epidemiology in Schools: Integrating Molecular Environmental and Social Surveillance Through Community Science
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- Reconstructing ancient genomes from gene counts: A robust likelihood framework with sampling bias correction
- Stable flapping flight in morphological space: Model, simulation, and explicit stability criteria
- Novel Knotted Solenoid fold with order-shifted coil arrangement leads to nontrivial 31 topology
- A parallel algorithm for the computation of the Jones polynomial
- Sparse identification of nonlinear dynamics and Koopman operators with Shallow Recurrent Decoder Networks
- Modelling the role of phages in biofilm ecosystems and the spread of antimicrobial resistance
- In silico investigation of the role of local and global inflammation-driven feedback in myelopoiesis and clonal cell expansion
- The ideal free distribution in temporally varying environments
- The role of antibody-mediated immunity in shaping the seasonality of respiratory viruses
- Theoretical origins of extreme cell differentiation irreversibility in volvocine algae: A dynamic model of organismal size effects
- Spatial pattern regulation in pine wilt disease models with feedback mechanisms
- A potential surrogate model for efficient inference of stochastic GLUT4 translocation
- When simple is enough: Binary models capture social complexity in coupled human-environment systems
- Parameterisation of epidemiological models from small field experiments: A case study of banana bunchy top virus transmission
- A sharp dichotomy for Wolbachia invasion: Critical release thresholds and global stability
- A new Fight-or-Flight Pacemaker Mechanism via Ryanodine Receptor abundance and superclustering
- scHilda: Hierarchical Integration of LLM with KG database for single cell type annotation
- Limited ‘heft’ of weight-based outcomes in predicting influenza A virus disease severity in ferrets
- RNAprecis: Prediction of full-detail RNA conformation from the experimentally best-observed sparse parameters
- The ecology and evolution of sub-exponential replicators
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- Primer: Drug discovery and patient-derived organoids
- Bifurcation theory and gene regulatory networks: A framework for understanding cell fate decisions in retinal regeneration
- Complex versus complicated systems biology, universality versus detailed modeling
- Simple systems, complex dynamics: Lessons from minimal gene regulatory networks
- Toward a systems view of life’s origins: Modeling the emergence of complexity across chemical, informational and ecological levels
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