Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Toward a general theory for the universality and scaling in critical thermal responses in biology
- Functional Emotion Modeling in Biomimetic Reinforcement Learning
- Critical Scaling and Metabolic Regulation in a Ginzburg--Landau Theory of Cognitive Dynamics
- A kinetic derivation of spatial distributed models for tumor-immune system interactions
- Diffusive Spreading Across Dynamic Mitochondrial Network Architectures
- Modularity is the Bedrock of Natural and Artificial Intelligence
- Convex Analysis of Relaxation Dynamics in Chemical Reaction Networks and Generalized Gradient Flows
- Physical principles of building protein megacomplexes in a crowded milieu
- Modeling Dynamics, Cell Type Specificity, and Perturbations in Gene Regulatory Networks
- AAVGen: Precision Engineering of Adeno-associated Viral Capsids for Renal Selective Targeting
- Geometric-Evolutionary Deep Learning Decodes the Human GPCR-Metabolome Interactome and Enables Systematic De-Orphanization
- Endocrine-metabolic decoupling drives stress vulnerability in dystrophin deficiency
- Leveraging Twin Information for Inference of Gene Regulatory Networks
- A Fine-Tuned Phosphatidylinositol Profile Contributes to Colonocyte Differentiation and Malignization: Evidence From Integrated Omics
- Multi-Omics Mapping of Human Kidney Reveals Complement-Mediated Cellular Dynamics During Progression of Focal Segmental Glomerulosclerosis
- A versatile method to pattern surfaces within microfluidic devices
- Integrative multi-omics and multi-trait analysis prioritizes regulatory mechanisms and genes for metabolic dysfunction-associated steatotic liver disease
- Single-phage profiling illuminates viral individuality during cell fate determination
- Flow constraints at infection site shape multiplication-dissemination trade-offs and opposite regulatory programs of Xanthomonas and Ralstonia xylem pathogens
- Microgravity affects the nervous system and aging in C. elegans through reduced tactile stimulation
- Time-to-retraction and likelihood of evidence contamination (VITALITY Extension I): a retrospective cohort analysis
- Higher exposure to secondhand smoking among adolescents living in Lusaka compared with the rest of Zambia in 2021
- Prevalence and factors associated with high-risk oncogenic human papillomavirus infection among women living with HIV in Kinshasa, the Democratic Republic of the Congo
- Quantifying bias from reverse causation in observational studies of dementia risk factors: A simulation study informed by age-specific reverse Mendelian Randomization
- Integrating measles wastewater and clinical whole-genome sequencing enables high-resolution tracking of virus evolution and transmission
- Measles, Rubella, and Mumps in Mexico: A National Serosurvey Highlighting Reemergence Risks
- THE EFFECT OF SMOKERS TRANSITIONING TO E-CIGARETTES ON PHYSICAL AND MENTAL HEALTH: AN EMULATED TRIAL USING LONGITUDINAL DATA.
- Joint modelling of PSA dynamics and prostate cancer risks: A population-based study
- Mediation of the relationship between air pollution and dementia: A UK Biobank study.
- Prevalence and Predictors of Cigarette Smoking Among School-Going Adolescents in Africa Based on the Global Youth Tobacco Survey: 2001-2021
- Gompertz growth with a shared carrying capacity optimally simulates primary and metastatic tumor growth dynamics
- Evaluating spatially targeted HIV interventions and harm reduction services among people who inject drugs in a high-burden setting
- Measuring hierarchical structure across hominid percussive tool-use sequences
- A Psychophysical Dataset for Vibrotactile Augmented Perception
- Parallel hierarchical encoding of linguistic representations in the human auditory cortex and recurrent automatic speech recognition systems
- Artificial intelligence for microbiology and microbiome research
- We wait for disease to shout—What if we listened when biology whispered?
- What problem do you hope bioengineering or synthetic biology approaches will enable us to tackle in the next decade?
- The hierarchical timescale hypothesis: Functional and structural convergence of biological networks and artificial neural nets
- Generative AI for synthetic biology: Designing biological parts, circuits, and genomes
- Operator-level quantum acceleration of non-logconcave sampling
- Strategy evolution on temporal hypergraphs
- Scaling laws for function diversity and specialization across socioeconomic and biological complex systems
- Leveraging probabilistic forecasts for dengue preparedness and control: The 2024 Dengue Forecasting Sprint in Brazil
- Reply to Cecchi and Palminteri: On the need to model temporal variation in learning rates
- Optimising chemotherapy for advanced high-grade serous ovarian cancer via delay-differential equations
- Age and generation-based model of metastatic cancer: From micrometastases to macrometastases
- The evolutionary success of angiosperms: a foundation of bioenergetic surplus
- Modeling how hunting strategies and pack size shape each other
- Local control of cellular proliferation underlies neuromast regeneration in zebrafish
- A partition method for bounding continuous-time Markov chain models of general reaction network
- Modeling periodic transcriptions in tandem gene systems
- Why does nature force the creation of proteobacteria community in the estuarine ecosystem? - A theoretical model
- Traveling wave formation enables strain coexistence in a spatial model of bacterial cross-feeding
- Bifurcation analysis and fear-induced reactions in non-refuged prey with cooperative hunting among predators: Deterministic and stochastic dynamics
- Hemodynamic impact of acute liver injury on cardiac function: An in silico study via a closed-loop cardiovascular model
- A novel transformer-based platform for the prediction and design of biosynthetic gene clusters for (un)natural products
- Ten simple rules for coordinating a large digital health project: Perspectives from EU and implications for global contexts
- Ten simple rules for building a collaborative coding culture
- How sleeping minds decide: State-specific reconfigurations of lexical decision-making
- Modeling and Simulation of the Role of Mass Testing in Controlling COVID-19
- Disorder and Homeostasis in ANIBOT A Biologically-Inspired Animal Robot
- Counting Rankings of Tree-Child Networks
- Inference of Genetic Networks from Pseudo Time Series of Single-cell Gene Expression Data using Modified Random Forests
- Asbestos Disease Initiation
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- Cell sorting models in tissue development
- Editorial overview: Mathematical modeling of disease processes
- Think before you fit: Parameter identifiability, sensitivity and uncertainty in systems biology models
- Machine-learned summary statistics for Bayesian inference of systems biology–model parameters: Opportunities and challenges
- Structural identifiability of compartmental models: Recent progress and future directions
- Spectral theory of stochastic gene expression: a Hilbert space framework
- Optimizing insecticide deployment strategies to delay quantitative resistance in mosquito populations
- Autocatalytic cores in the diluted regime: classification and properties
- Infinitesimal homeostasis in mass-action systems
- The adaptation property in non-equilibrium chemical systems