Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
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- Robust and Quality-of-Life-Aware Treatment Protocols in NSCLC using Deep Reinforcement Learning
- High-dimensional HIV-1 quasispecies modeling guides escape-proof antibody design
- Systems genetics identifies ETS1 as a stress-dependent regulator of adipocyte insulin action and heme-iron homeostasis
- INFORME: coupling information-theoretic experimental design with nonlinear mixed-effects modeling for efficient observation scheduling
- Predicting Cerebral Pericyte Contractility Across Experimental and Physiological Conditions: an in-silico framework
- Single-cell informed metabolic modeling reveals organ-specific metabolic adaptations in breast cancer organotropism
- Sobetirome, a thyroid hormone receptor beta agonist, is a potential therapeutic agent for pulmonary fibrosis
- Mechanistic modeling of bacterial translation initiation across growth conditions
- PhysiCelldFBA: Linking single-cell genome-scale metabolism to spatially explicit multicellular dynamics
- Division-resolved inference of flow and trajectories in proliferating cell populations
- Socio-demographic and environmental factors amplify typhoon-related excess mortality in Japan
- Testing Claimed Associations of Prenatal Acetaminophen with Neurodevelopmental Disorders: Re-analysis Using Bias-Correction Methods
- Wastewater Surveillance of Oncogenic Viruses: A Baseline Assessment in Southeast Queensland, Australia
- Connecting diet and disease: Using Mendelian randomisation to bridge the gap
- A target trial emulation study to estimate the causal effect of intravenous iron use during pregnancy and its effect on haematological and birth outcomes in Pakistan
- Hybrid risk scores integrating polygenic and clinical variables for endometriosis prediction
- A mechanistic statistical model of dengue dynamics in an endemic region
- Diversifying deaths: the shifting spectrum of childhood respiratory infectious mortality, 1990-2023: a systematic analysis of the Global Burden of Disease Study 2023
- No convergence in three decades: national trajectories of episode-fatality ratios for childhood lower respiratory infections in 204 countries, 1990-2023
- From Structural Resources to Latent Protective Capacity: A Bayesian Multilevel Analysis of Flood Exposure and Depressive Symptoms in Indonesia
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- Mechanical feedback drives fractal airway organization
- Beyond differential expression: Differential variability as an underappreciated axis in transcriptomics
- The emergence of the fractal bronchial tree
- High-throughput DNA engineering by mating bacteria
- A data-driven modeling framework for mapping genotypes to synthetic microbial community functions
- Correction for Zhang et al., Reconstructing the early spatial spread of pandemic respiratory viruses in the United States
- Uncovering dynamic human brain phase coherence networks
- Stochasticity and probabilistic trajectory scoring are essential for data-driven closures of chaotic systems
- Group size effects and collective misalignment in LLM multi-agent systems
- Many-eyes and sentinels in selfish and cooperative groups
- A stochastic agent-based model for naive CD8+ T cell recirculation dynamics in mice
- A revised ribosome–antibiotic model with proportional feedback synthesis explains recovery from translation inhibition
- Pandemic waves as the outcome of coupled social and disease dynamics: A mathematical modelling study
- A systems-based analysis of feedback structure and characteristic timescales in turnover-mediated mechanical adaptation
- From signal dynamics to cell fate: The role of learning duration
- Perspective: Allee effects in theory and reality
- Hybrid mechanistic-machine learning models in biosciences: Causality, forecasting, and lab-to-field translation
- Logistic gene regulatory networks: A modeling framework beyond Hill functions
- Permanent charge effects on current-voltage relations via classical Poisson-Nernst-Planck systems under relaxed electroneutrality boundary conditions
- Beyond : How vaccination and post-infection mortality drive epidemic persistence and oscillations
- PCIPG: A comprehensive framework for protein complex identification based on a probabilistic graphical model
- Robust circular cluster-based statistics for respiration-brain coupling
- Topological potentials guiding protein self-assembly
- Sequence-free landscape inference for directed evolution
- Balanced DNA interpolation improves learning of genetic distance-informed embeddings in plants
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- The evolution of standards in systems biology: From metabolic and multi-scale to whole-cell models
- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
- Amniote gastrulation in silico
- A dialog between cell adhesion and topology at the core of morphogenesis
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