Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Universal BCI Personalization: One API for Frozen EEG Trunks and Foundation Models
- Loom: Multi-Region Analysis of Spatial Transcriptomics with Local Neighborhoods and Global Trajectories
- NUMA balancing hampering performance of spiking network simulations
- On a cross coupling of Rulkov neural maps
- Jointly estimating transmissibility and prior immunity from epidemic time series
- Hair is a functionally graded composite, not a uniform fiber
- Cycles of Discourse, Speech Dysfluency, and Active Inference
- Emergent population dynamics of random walkers with cooperative reproduction and spatial selection
- Short-Term Precision and Least Significant Change of 3D-DXA Cortical and Trabecular Proximal Femur Measurements Across Hologic DXA Scanner Models
- Enumerating monophyletic characters in mathematical phylogenetics
- GreenSloth: a curated database and executable platform for mechanistic photosynthesis models
- Comparison of nuisance function construction strategies for double machine learning causal inference in single-cell transcriptomics: shared unsupervised deep learning does not require cross-fitting
- Kruppel-like factors KLF5 & KLF8 emerge as master transcriptional regulators of Alzheimers disease, as revealed on cell fate regulomes in human brain organoids
- Network-scale disruption of RNA-protein interactions by a bioaccumulating small-molecule drug
- Regulatory Bias Constrains Epigenetic Aging Trajectories
- Morphomechanically-Informed Spatial Curvature Sequencing in Prostate Cancer
- Single-cell foundation models predict durable CAR T response despite imperfect cell annotation
- Flux-species sampling enables holistic exploration of biocircuit behavior
- A hybrid machine learning and enzyme-constrained metabolic model for ab initio prediction of proteome reallocation
- Dynamic knowledge representation of blood brain barrier activation, injury and restitution with a novel agent-based model
- Cardiovascular Risk in BRCA1/2 Mutation Carriers: A Matched Cohort Study of Breast Cancer Survivors
- Surrogate Endpoint Evaluation with Causal Mediation: Lessons from the A4 Trial
- Complexity of coupled behaviour-disease models and their relative performance against empirical data
- Risk-targeted interventions for measles control- Lessons from an emergency response project in the Katanga Region, Democratic Republic of the Congo (2021-2023)
- Risk factors influencing local cholera transmission in urban and rural endemic zones: the experience of Goma and Bukama, Democratic Republic of the Congo, 2021-2022.
- Importation risk and preparedness priorities across Africa in the 2026 Bundibugyo Ebola outbreak
- Noise is the signal: variability in surveillance data provide early indication of epidemic phase
- Developing intrinsic capacity measures for research and practice in an Australian context
- The Relationship Between an Agricultural Intervention Integrated Within a Group-Based Microfinance Program and Depression and Psychological Stress in Rural Kenya
- What constitutes safe and effective dose titration of methadone and buprenorphine/naloxone? protocol for a population-based target trial emulation
- RETROFIT: Reference-free deconvolution of cell-type mixtures in spatial transcriptomics
- Spatialproteomics: an interoperable toolbox for analyzing highly multiplexed fluorescence image data
- Pathology-CoT: learning visual chain-of-thought agents from expert whole-slide image diagnosis behaviour
- A benchmark study of vision and pathology foundation models for computational pathology
- Direct lipid interactions control SARS-CoV-2 M protein conformational dynamics and virus assembly
- RIG-Ing the system to balance immune activation and inflammatory tissue damage in the airways
- Programmable regenerative tissues: Converging mammalian synthetic biology and tissue engineering
- The molecular landscape of cellular metal ion biology
- BulkFormer: A large-scale foundation model for bulk transcriptomes
- Quantitative cytokine profiling of primary human macrophages reveals distinct single-cell modes of trained immunity
- Measurement accuracy in mechanobiology: A unifying statistical framework for testing cellular forces
- Hazard curvature makes within-host variability costly for survival
- Correction for Patel, The simplicity of the Hodge bundle
- Daring few, patient many: Division of labor in decentralized foraging collectives
- Modeling framework to demonstrate elimination of a vector population: Tsetse elimination in Chad
- Evolution of quantitative traits: Exploring the ecological, social and genetic bases of adaptive polymorphism
- Directed cell migration from protrusion-adhesion coupling under local chemotactic regulation
- Integrated tick management strategies in fragmented peridomestic environments
- The male-biased sex ratio in humans and its role in the transition from promiscuity to pair bonding
- Quantifying the counter-intuitive effects of vaccination by coupling the transmission dynamics of COVID-19 and the evolution of human behaviors
- Seasonal impacts on brucellosis transmission mediated by live sheep supply-demand dynamics
- Worker allocation between defence and non-defence tasks in social insect colonies: Thresholds and stable configurations
- Anticipating critical transitions in fear-mediated mutualistic ecological system: Effects of stochasticity and early warning signals
- Dynamics of discrete-time competition models with interspecific mating and reproductive interference
- Fire-driven tick-host dynamics and their impact on tick-borne disease spread
- Reconstruction of historical malaria transmission in Senegal using multiplex serocatalytic models
- Twelve quick tips for AI-assisted coding in science
- Quantitative analysis of massive SARS-CoV-2 testing in the community in France in 2021–2022 reveals the associations of variant, vaccination, and age with viral dynamics in symptomatic individuals
- ALFAssay: A feed‑forward neural network for quantitative fragmentomics‑based ctDNA profiling in breast cancer
- Revealing dichotomous prior biases in social anxiety through a social prism model
- Multiscale Analysis of a Kinetic Equation for Mechanotaxis
- A Graph-Theoretical Framework for Automated Computation of Reproduction Numbers in Deterministic Epidemiological Models
- Mathematical Modelling of the Mitochondrial Dicarboxylate Carrier (SLC25A10)
- Who wins? Analysis and Simulation of a Batch Culture Model of Bacterial Competition in the Presence of Plasmids
- Spatial Establishment of Autotetraploid Populations Follows the Propagation of Bistable Waves of Advance
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- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
- A dialog between cell adhesion and topology at the core of morphogenesis
- Computational models of cellular bioenergetics indicate the role of Ca2+-regulated pyruvate dehydrogenase in metabolic remodeling
- Dynamics of cell fate patterning in discrete multicellular systems
- Genome rearrangements as double coset Markov chains
- Elusive chaos: dynamics of a data-based model of flour beetle growth with time delay
- A Degenerate Bifurcation Perspective on High Sensitivity in a Modified Leslie-Gower Model with Additive Allee Effect
- Taking into account the influence of climatic factors and age in the mathematical modeling and analysis of the dynamic transmission of malaria
- A novel mathematical model of seasonality in Oropouche virus transmission in Amazonas, Brazil