Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Exploring Multi-Objective Trade-offs in Reference Compound Selection for Validation Studies of Toxicity Assays
- Mechanical stress induced by the polymerisation of an active gel near a surface
- The finest decompositions' architecture of a reaction network
- Transient dynamics of associative memory models
- Topological shape transform for thymus structures
- Robust Parametric Estimation of Avian Cranial Morphology
- Hybrid Quantum Generative Adversarial Networks for Molecular Simulation and Drug Discovery
- Transcranial Alternating Current Stimulation (tACS) for patients with Post-Stroke Anomia: Preliminary Data on Picture Naming Performance
- Hierarchical Multiscale Structure-Function Coupling for Brain Connectome Integration
- CERN: Correcting Errors in Raw Nanopore Signals Using Hidden Markov Models
- Modeling the Role of Platelet-Released Polyphosphates in Tissue-Factor-Initiated Coagulation under Flow
- Integrating metagenome-scale metabolic modelling and metabolomics to identify biochemical interactions in Microcystis phycospheres
- A graph-based learning approach to predict the effects of gene perturbations on molecular phenotypes
- FASTERCC: Accelerating Flux Consistency Testing and Context-Specific Reconstruction for Large-Scale Metabolic Network Models
- X-Cell: Scaling Causal Perturbation Prediction Across Diverse Cellular Contexts via Diffusion Language Models
- Circulating miRNA-Protein Signatures Predict Outcomes in Pediatric Dilated Cardiomyopathy
- Stochastic optimal control simulations of walking: potential and perspective
- Diverse high-fat diets drive multi-omic reprogramming that persists after dietary reversal
- New perspectives in assessing environmental risks for birds: a simple TKTD framework to link growth and reproduction energy budget to chemical stress
- TRAILBLAZER: generative multicellular perturbation model of biology
- Untargeted Screening of Environmental and Endogenous Metabolites and Risk of Incident COPD: A Prospective Study in Three European Populations
- Integrating Lung Tissue-based Transcriptome-Wide Association Study with Single-cell RNA-sequencing Uncovers Susceptibility Genes and Cell Types Underlying Lung Cancer Risk
- Mapping global emergence of pathogens with epidemic and pandemic potential to inform and accelerate pandemic prevention, preparedness, readiness and response
- Predictive and Seasonal Dynamics of the Human Wastewater Virome
- Effect of an integrated community-based intervention on antenatal care, incidence of malaria in pregnancy, adverse pregnancy and birth outcomes in rural Mali and Burkina Faso: The INTEGRATION cluster randomized trial.
- Application of wastewater and environmental surveillance for pathogenic agents during the 2024 National Football League (NFL) Draft in Detroit, Michigan (USA)
- Public attitudes toward sharing health data for artificial intelligence: Differences by data type and sector in the Health in Central Denmark cohort
- Epidemiological, vectorial and landscape changes in the context of declining Onchocerca volvulus transmission across the Kakoi-Koda focus, Ituri, Democratic Republic of the Congo
- A Machine Learning Approach to Defining and Predicting the Scale of Typhoid Fever Outbreaks
- Sitting time enhances the effect of genetic liability to obesity on hypertension
- Post-pandemic changes in population immunity have reduced the likelihood of emergence of zoonotic coronaviruses
- AI-based chest X-ray prioritization in the lung cancer diagnostic pathway: the LungIMPACT randomized controlled trial
- Generating 3D models of complex carbohydrates with GLYCAM-Web
- Self-reorganization and information transfer in large-scale models of fish schools
- Interpretability and implicit model semantics in biomedicine and deep learning
- Antithetic integral feedback control redesigned for improved dynamics and lower noise
- Haplotype-resolved reconstruction and functional interrogation of cancer karyotypes
- Fast, long-range intercellular signal propagation through growth-assisted positive feedback
- Competition and compromise between exogenous probiotics and native microbiota
- Dynamics of genetic circuits in Pseudomonas protegens
- On the optimal integration of intelligent agents into network systems to steer cooperation
- Stretch and flow at the gliovascular interface: High-fidelity modeling of astrocyte endfeet
- Mechanical compliance enhances the impulsive energy absorption of glassy polymer films
- Operator-level quantum acceleration of non-logconcave sampling
- Strategy evolution on temporal hypergraphs
- Stochastic eco-evolutionary dynamics of multivariate traits: A framework for modeling population processes illustrated by the study of drifting -matrices
- Effects of insecticides and awareness on the dynamics of a delayed malaria model: A real-data calibration
- A computational study of adiposity-associated factors in the inflammatory process of osteoarthritis
- Editorial: Improving pandemic and epidemic responses - novel methods and lessons learned from previous infectious disease outbreaks
- Global metabolic coherence as a derived property of microbial communities: A discrete hodge framework
- Persistence for a class of nonautonomous systems of differential equations with unbounded delays
- Oncolytic viral therapy under type I interferon regulation: Mathematical modeling and analysis
- Stability analysis of a novel HIV model with CTL immune response, latency age, infection age and a saturated infection rate
- Genuine and spurious bistability in a simple epidemic model with waning immunity
- Evolutionary tendency of vegetation systems at critical points — based on optimal control methods
- PepLM-GNN: A graph neural network framework leveraging pre-trained language models for peptide-protein binding prediction
- D-LIM: A neural network for interpretable gene–gene interactions
- Sensitivity analysis enlightens effects of connectivity in a Neural Mass Model under Control-Target mode
- Predicting viral sensitivity to antibodies using genetic sequences and antibody similarities
- A coupling model of transcranial magnetic stimulation induced electric fields to neural state variables
- Modelling and Simulation of Collective Cell Migration with Non-Local Interactions on Time-Dependent Spatial Domains
- Emergence of Bursting and Delay-Induced Spiral Patterns in Eco-Epidemiological Systems
- Final-Size Solutions for SIRI Models with Vaccination
- Characterising Epigenetic Tipping Points using a Spectral Dimension Reduction Approach
- Identifies Tipping Points of cell Fate Transitions by Network Relative Entropy
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- Simple systems, complex dynamics: lessons from minimal gene regulatory networks
- Toward a systems view of life’s origins: Modeling the emergence of complexity across chemical, informational and ecological levels
- Intercellular coupling and synchronization of circadian clocks: Theoretical insights and experimental perspectives
- Carleman-linearized epidemic models as a route to a data-driven algebraic estimate of the effective reproduction number
- Understanding the temperature response of biological systems: Part II - Network-level mechanisms and emergent dynamics
- Mathematical dissection of tumor phenotypic heterogeneity in a spatial data-informed nonlocal reaction-diffusion model
- Order-Dependent dissimilarity measures on phylogenetic trees
- Rate-induced tipping in a lake eutrophication model coupled with human activities
- Derivations of animal movement models with accumulated memory
- Extending a 1D Multi-Scale Plant Growth Model to Include Branching under Environmental and Soil Nutrient Dynamics