Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Can You Trust Frozen Hematology Foundation Models under Acquisition Shift?
- CMADiff: Cross-Modal Aligned Diffusion for Controllable Protein Generation
- Can extrinsic methods reveal intrinsic structure? Complementing IIT with QStr
- FBApro: A fast, simple linear transformation for diverse metabolic modeling tasks
- Smooth $\%$MinMax: A Differentiable Relaxation for Codon Harmonization
- Interpreting Protein Language Model Embeddings via Orthogonal Projection for Protein Fitness Prediction
- GenAIT: Development and Validation of an Objective Generative AI Literacy Test for High School Students
- Propensity Straight-Through Gradients for Discrete Stochastic Systems
- The emergence and evolution of a referential code in populations of bee-like agents
- A meta-algorithm for ab initio reconstruction of complex mixtures in cryo-EM
- A mathematical investigation of the interplay between vasculature and intratumoral cellular heterogeneity during tumor progression
- Regulatory stochasticity drives opposing phenotypic outcomes in cell-fate decision networks
- In the same cell, the proteome defines cellular state and the transcriptome marks transitions
- A Bayesian Multi-Species Approach Infers Gene Regulatory Networks Across Non-Model Organisms
- Inference of self-limiting neutrophil swarming dynamics using Bayesian physics-informed neural networks
- Likelihood-Based Inference and Model Selection for Stochastic Gene Expression in Probability-Generating-Function Space
- Genome mutations and environmental perturbations reshape the epigenomic topology to drive functional collapse in digital cells
- A pharmacokinetics-informed ODE extrapolates long-term fenofibrate transcriptomic responses
- Placental microRNA signatures of spontaneous preterm birth
- Biphasic Temporal Remodeling Of The Proteome In A Polyglutamine-Expanded Huntingtin In Vitro Aggregation Cell Model: From Early Rna-Regulatory Compensation To Selective Mitochondrial Energy Failure
- Real-Time Genomic Epidemiology Approaches to a Measles Outbreak Response in Utah
- Health, behavioural, and social correlates of depressive symptoms among Brazilian adults: a preregistered exposure-wide association study with discovery and replication in two independent nationally representative cross-sectional surveys
- Determinants of Access to Autism Spectrum Disorder Diagnostic Services: A Systematic Review and Meta-analysis of Factors Associated with Diagnostic Completion, Diagnostic Pathways, and Timely Diagnosis
- Modeling The Role of Variant Evolution and Population Immunity in Epidemiological Patterns of Pandemic Respiratory Viruses
- Wastewater and Environmental Surveillance in Cities with Sewered and Non-sewered Sanitation: Evidence from Kampala, Uganda
- Social functioning in Primary Ciliary Dyskinesia (PCD): a study of lived experience, relationships and support of patients and caregivers
- New-onset type 2 diabetes mellitus and obesity-related cancer risk: a matched cohort study (UK Biobank)
- Over a Billion More Dark Morning School Commutes for K-12 Children under the Sunshine Protection Act
- Associations Between Body Mass Index, Visual Acuity, and Resting Heart Rate in Adolescents: A Multifactorial Analysis of Physical Examination Data
- Transformer-Based Survival Model for Cardiovascular Risk Prediction from Longitudinal Health Checkup Data
- Why variant effect predictors and multiplexed assays agree and disagree
- Mucosal IgA to pre-fusion F protein predicts protection from RSV infection in a high burden setting
- Longitudinal alignments and syntheses of multimodal clinical data for personalized medicine with the PULSE framework
- Generalizable multiple-instance learning for computational pathology
- A patient’s longitudinal history reconstructs their unmeasured molecular profile
- Mechanical feedback drives fractal airway organization
- Beyond differential expression: Differential variability as an underappreciated axis in transcriptomics
- The emergence of the fractal bronchial tree
- High-throughput DNA engineering by mating bacteria
- A data-driven modeling framework for mapping genotypes to synthetic microbial community functions
- Uncovering dynamic human brain phase coherence networks
- Stochasticity and probabilistic trajectory scoring are essential for data-driven closures of chaotic systems
- Group size effects and collective misalignment in LLM multi-agent systems
- Many-eyes and sentinels in selfish and cooperative groups
- One rule does not fit all: Deviations from universality in human mobility modeling
- A systems-based analysis of feedback structure and characteristic timescales in turnover-mediated mechanical adaptation
- From signal dynamics to cell fate: The role of learning duration
- Origin of fast backward steps and detachment of kinesin motor under backward load
- The evolution of socially modulated dispersal
- Cell–cell adhesion cannot sustain extended follower streams in a minimal non-local model of leader–follower migration
- Mathematical modeling of the effects of potassium ions on the tumor immune system and virotherapy
- Modeling the evolutionary dynamics of quantitative antiretroviral resistance in HIV-1 infection
- Hierarchical mathematical modelling of patients with myeloproliferative neoplasms captures interferon-α treatment responses and allows for personalised and population predictions
- Seasonal impacts on brucellosis transmission mediated by live sheep supply-demand dynamics
- Coupled information-epidemic dynamics with emotional thresholds and behavioral regression on multiplex networks
- Noisy models of the ventral stream reveal the impact of recurrence and learned representations on information processing timescales
- Systematic multivariate analysis of chromatin complex dependencies reveals Set1C/COMPASS as a melanoma-enriched epigenetic vulnerability
- Leveraging synthetic and genetic data to improve epidemic forecasting
- iDCF: Interpretable deconvolution of cell fractions via biologically-informed deep learning using scRNA-seq data
- Modeling the influences of non-local connectomic projections on geometrically constrained cortical dynamics
- Gene Genealogies in Haploid Populations Evolving According to Sweepstakes Reproduction
- Delay Differential Equation Approach to Oligomerization Reveals the Delay Dynamics Underlying Oscillations in Mitochondrial Fission
- The Bulletin of Mathematical Biology and the Society for Mathematical Biology: Strengthening our Shared Community
- Climate-Informed Predictive Optimal Control of Desert Locust Dynamics Under Machine-Learning Climate Forcing
- Metal-Ion-Mediated Amyloid-$$\beta $$ Aggregation in Alzheimer’s Disease: A Mathematical Model of Chelation and Inhibitory Therapies
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- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
- Amniote gastrulation in silico
- A dialog between cell adhesion and topology at the core of morphogenesis
- Computational models of cellular bioenergetics indicate the role of Ca2+-regulated pyruvate dehydrogenase in metabolic remodeling
- Correction to: Transient tumor-induced disruption of peristaltic flow: a magnetohydrodynamic modeling framework
- Disease extinction in finite time for a continuous-time SIRS model
- On the stability of discrete reaction-diffusion systems of networked dynamical systems
- Mathematical modeling for a primitive form of habituation in an amoeba
- Positive equilibria in mass action networks: geometry and bounds