Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Beyond variance: sensitivity-based dimensions in brain networks underlie individual differences in cognitive ability
- Bolek: A Multimodal Language Model for Molecular Reasoning
- Temporal and probabilistic comparisons of epidemic interventions
- LITcoder: A General-Purpose Library for Building and Comparing Encoding Models
- CellxPert: Inference-Time MCMC Steering of a Multi-Omics Single-Cell Foundation Model for In-Silico Perturbation
- Sample volume as a key design parameter in affinity-based biosensors
- NeuroAI and Beyond: Bridging Between Advances in Neuroscience and ArtificialIntelligence
- PhenotypeToGeneDownloaderR: automated multi-source retrieval and validation of phenotype-associated genes
- Measuring Understanding Through Discrete Compositional Knowledge Structures in Hierarchical Automata
- Heat-tree: Cross-platform software for interactive and embeddable phylogenetic tree visualization and editing
- Monocyte Migration Emerges from a Divergent Chemokine Signaling Network
- PEXMap: A proteogenomic method for exon and isoform level mapping of mass spectrometry derived peptides
- Spatiotemporal Modeling of GPCR Signaling: The Role of Endosomal Dynamics and Receptor Recycling
- A Comprehensive Mathematical Model of Avidity in Cytokine Signaling
- AM-DMF-SCP-pro: An Ultrafast and Streamlined Nanolitre-Scale Lab-on-a-Chip Platform for Single-Cell Proteomics and Tumor Microenvironment Profiling
- Extraction-dependent bone proteomics reveals distinct stable and dynamic protein modules during early post-exposure degradation
- A Scalable Sign-Aware Multi-Omics Knowledge Graph Foundation Model for Mechanistic Drug Action and Clinical Response Predictions
- Systems-Level Transcriptomics Maps Multilevel Remodeling and Pathway-Selective Translational Alignment Across Murine Models of Cardiometabolic HFpEF
- Supervised restricted data fusion with common, local & distinct components
- Systems modeling identifies phenotype-determining signaling pathways controlled by phosphatase PTPRJ in diverse receptor tyrosine kinase activation settings
- Frequent introductions and climate suitability drive increasing dengue risk in Florida
- Prevalence and factors associated with tobacco and nicotine product use among adolescents in the Democratic Republic of the Congo: evidence from a cross-sectional national household survey
- Cross-ancestry proteome-wide Mendelian randomization prioritizes 12 plasma protein candidates for breast cancer risk
- Fecal Biomarkers to Characterize Intestinal Inflammation among Children with Medically Attended Diarrhea across Six Low-Resource Settings: Findings from the Enterics for Global Health (EFGH) Shigella Surveillance Study
- Early-life hallmarks of polygenic liability to adult internalizing-cardiometabolic multimorbidity
- Hepatitis E virus seroprevalence in South Africa from a multi-site study among HIV-negative and HIV-positive adults and age-stratified children (2-17 Years)
- The Role of Type 2 Diabetes in Shaping Multimorbidity Progression: Evidence from the UK Biobank Cohort
- Lipoprotein(a): Particle vs. Mass and Cardiovascular Events in the Cardiovascular Risk in Young Finns Study population.
- Frequency and Medical Costs of Hypersensitivity- and Anaphylaxis-Related Adverse Events for Different Intravenous Iron Products Using the US Food and Drug Administration Adverse Event Reporting System (FAERS)
- Early-life dentine based elemental biodynamics and cord blood telomere length
- Structural and dynamic studies uncover a distinct allosteric modulatory site at the µ-opioid receptor
- Inference of latent epidemic regimes and generative simulations reveal how inequality and mobility shape COVID-19 transmission
- Digital twins and digital models of the human circulatory system
- DeepSeMS: revealing the hidden biosynthetic potential of the global ocean microbiome with a large language model
- Tracing the rise of biomedical foundation models
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- Stable flapping flight in morphological space: Model, simulation, and explicit stability criteria
- Novel Knotted Solenoid fold with order-shifted coil arrangement leads to nontrivial 31 topology
- A parallel algorithm for the computation of the Jones polynomial
- Sparse identification of nonlinear dynamics and Koopman operators with Shallow Recurrent Decoder Networks
- Deep learning framework for quantifying self-organization in Myxococcus xanthus
- The role of antibody-mediated immunity in shaping the seasonality of respiratory viruses
- Theoretical origins of extreme cell differentiation irreversibility in volvocine algae: A dynamic model of organismal size effects
- An analytically tractable framework for transcription–extrusion coupling in chromatin loop formation
- How do foragers use nonlocal information? A novel modeling framework
- Model reduction and analysis: A case study of a malaria control model
- A potential surrogate model for efficient inference of stochastic GLUT4 translocation
- When simple is enough: Binary models capture social complexity in coupled human-environment systems
- Parameterisation of epidemiological models from small field experiments: A case study of banana bunchy top virus transmission
- A sharp dichotomy for Wolbachia invasion: Critical release thresholds and global stability
- The basic reproduction rate for epidemic models structured by chronological age and infection age
- Explainable AI-driven diagnosis model for early glaucoma detection using grey-wolf optimized extreme learning machine approach
- VUStruct: A compute pipeline for high throughput and personalized structural biology
- Co-morbid biomarkers for sarcopenic obesity associated with gut microbiota metabolites: From burden to treatment
- Predicting protein cascade expression from H&E images
- Evaluating the utility of amino acid similarity-aware kmers to represent TCR repertoires for classification
- Observer-Based Source Localization in Tree Infection Networks via Laplace Transforms
- Analysis of the Modulation of RAF Signaling by 14-3-3 Proteins
- Statistical and Structural Bias in Birth-Death Models
- Stochastic Analysis of Taxis and Kinesis Properties of Colonial Protozoa
- A Mathematical Model for Smooth Muscle Cell Phenotype Switching In Atherosclerotic Plaque
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- Primer: Drug discovery and patient-derived organoids
- Complex versus complicated systems biology, universality versus detailed modeling
- Simple systems, complex dynamics: Lessons from minimal gene regulatory networks
- Toward a systems view of life’s origins: Modeling the emergence of complexity across chemical, informational and ecological levels
- Intercellular coupling and synchronization of circadian clocks: Theoretical insights and experimental perspectives
- Why is it easier to predict the epidemic curve than to reconstruct the underlying contact network?
- Unravelling the spatiotemporal dynamics of amyloid-$$\beta $$–induced astrocyte–neuron network model in Alzheimer’s disease
- Stability and Self-Organized Patterns in Coupled Ecohydrological–Fire Dynamics: A Model of Vegetation–Rainfall–Bushfire Interactions
- Threshold dynamics of a HBV infection model with degenerate diffusion, DNA-containing capsids and time-delays in heterogeneous environment
- On learning functions over biological sequence space: relating Gaussian process priors, regularization, and gauge fixing