Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- BioKERN: Biological Kernel Regularization for Histology-to-Transcriptomics Neighborhood Retrieval
- Inkspot: A stress-resilient, anthocyanin rich, dwarf tomato variant for off-world cultivation
- Dendritic structure enables powerful plasticity
- InfoDPP-PAC: Principled Patch Selection for Whole Slide Image Analysis
- Distributed delay stabilizes bistable genetic networks
- On Tree-Network Distinguishability and Full Identifiability of Phylogenetic Networks
- Kernel-Dependent Pattern Formation in a Population Model with Nonlocal Facilitation and Competition
- Data-Driven Modeling of Spatiotemporal Dynamics Using Multimodal Imaging Data
- Global geometry of the genotype-phenotype map illuminates a trade-off between penetrance and mutational adaptability
- Primate vision reveals a missing principle for robust dynamic AI
- Regulatory stochasticity drives opposing phenotypic outcomes in cell-fate decision networks
- In the same cell, the proteome defines cellular state and the transcriptome marks transitions
- Likelihood-Based Inference and Model Selection for Stochastic Gene Expression in Probability-Generating-Function Space
- Genome mutations and environmental perturbations reshape the epigenomic topology to drive functional collapse in digital cells
- A pharmacokinetics-informed ODE extrapolates long-term fenofibrate transcriptomic responses
- Placental microRNA signatures of spontaneous preterm birth
- Biphasic Temporal Remodeling Of The Proteome In A Polyglutamine-Expanded Huntingtin In Vitro Aggregation Cell Model: From Early Rna-Regulatory Compensation To Selective Mitochondrial Energy Failure
- A generalized growth law for translation- and transcription-targeting antibiotics captures drug interactions
- Subgenome-Level Phylogeny Reveals an Allopolyploid Origin of Chloranthales from Ancestral Monocot and Eudicot Lineages
- The diverse functions of viral microproteins
- Relations between prenatal sleep health and maternal weight retention 2 to 7 years after a first birth: the NuMoM2b-HHS
- Race-Specific Dementia Risk Prediction Using 2024 Lancet Commission Risk Factors and Resting Heart Rate: A Survival Analysis of 55,004 NACC Participants
- Metabolomic signatures of data-driven type 2 diabetes subtypes and their associations with dementia and stroke risk
- Human Behavior and Built Environments Shape Influenza Seasonality in the US
- Effects of Adolescent Parenting Styles on Adult Cardiovascular Conditions: A Population-Based Cohort Study
- MASCOT-DS improves transmission dynamics inference by integrating multiple epidemiological data streams with phylodynamic inference
- Robust measles vaccine allocation in US schools requires hedging against unmeasured introduction risk
- Synthetic Spatiotemporal Covid-19 Data Replicates Generated via the USPopulationSampler R Package
- Joint Heat and PM2.5 Exposure Across US Metropolitan Areas: Multi-Stressor Disparities, Historical Redlining, and a Multi-Metric Assessment Framework
- Returning to school during Ebola: an exploratory health-zone framework for scenario-based school-system introduction pressure during the September 2026 rentree in eastern Democratic Republic of the Congo
- Generalizable multiple-instance learning for computational pathology
- Mucosal IgA to pre-fusion F protein predicts protection from RSV infection in a high burden setting
- Longitudinal alignments and syntheses of multimodal clinical data for personalized medicine with the PULSE framework
- A patient’s longitudinal history reconstructs their unmeasured molecular profile
- Minimising mutation load as a mechanism for low-dose hyper-radiosensitivity and induced radioresistance
- Mechanical feedback drives fractal airway organization
- Beyond differential expression: Differential variability as an underappreciated axis in transcriptomics
- The emergence of the fractal bronchial tree
- High-throughput DNA engineering by mating bacteria
- A data-driven modeling framework for mapping genotypes to synthetic microbial community functions
- Stochasticity and probabilistic trajectory scoring are essential for data-driven closures of chaotic systems
- Group size effects and collective misalignment in LLM multi-agent systems
- Many-eyes and sentinels in selfish and cooperative groups
- Hyperedge approximation for stochastic processes on higher-order networks
- Attention to heterogeneous information sources affects epidemic outcomes
- A systems-based analysis of feedback structure and characteristic timescales in turnover-mediated mechanical adaptation
- From signal dynamics to cell fate: The role of learning duration
- Origin of fast backward steps and detachment of kinesin motor under backward load
- The evolution of socially modulated dispersal
- Cell–cell adhesion cannot sustain extended follower streams in a minimal non-local model of leader–follower migration
- Mathematical modeling of the effects of potassium ions on the tumor immune system and virotherapy
- Modeling the evolutionary dynamics of quantitative antiretroviral resistance in HIV-1 infection
- Hierarchical mathematical modelling of patients with myeloproliferative neoplasms captures interferon-α treatment responses and allows for personalised and population predictions
- Seasonal impacts on brucellosis transmission mediated by live sheep supply-demand dynamics
- Coupled information-epidemic dynamics with emotional thresholds and behavioral regression on multiplex networks
- The multi-omics fallacy in microbiome science
- High reelin expression may explain why a subgroup of entorhinal cortex neurons functions as an initial nucleation site of Alzheimer’s disease
- Theory and evidence of amplitude control by frequency detuning in a coupled neuronal oscillator system
- Manifold-constrained plasticity enables stable learning in recurrent neural circuits
- How host mobility formulations shape estimates of pathogen dispersal and epidemic risk in non endemic regions
- Gene Genealogies in Haploid Populations Evolving According to Sweepstakes Reproduction
- Delay Differential Equation Approach to Oligomerization Reveals the Delay Dynamics Underlying Oscillations in Mitochondrial Fission
- The Bulletin of Mathematical Biology and the Society for Mathematical Biology: Strengthening our Shared Community
- Climate-Informed Predictive Optimal Control of Desert Locust Dynamics Under Machine-Learning Climate Forcing
- Metal-Ion-Mediated Amyloid-$$\beta $$ Aggregation in Alzheimer’s Disease: A Mathematical Model of Chelation and Inhibitory Therapies
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- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
- Amniote gastrulation in silico
- A dialog between cell adhesion and topology at the core of morphogenesis
- Computational models of cellular bioenergetics indicate the role of Ca2+-regulated pyruvate dehydrogenase in metabolic remodeling
- Correction to: Transient tumor-induced disruption of peristaltic flow: a magnetohydrodynamic modeling framework
- Disease extinction in finite time for a continuous-time SIRS model
- On the stability of discrete reaction-diffusion systems of networked dynamical systems
- Positive equilibria in mass action networks: geometry and bounds
- Mathematical modeling for a primitive form of habituation in an amoeba