Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Does a Flux-Defined Markov Blanket Screen Self-Replicating Gray--Scott Spots? A Computational Test of a Blanket Condition from the Free Energy Principle
- FRIGID: Scaling Diffusion-Based Molecular Generation from Mass Spectra at Training and Inference Time
- Comparing Measurements of Pictorial Depth: Conditions for Placing Methods, Observers and Depiction Styles on One Scale
- Tipping points in complex ecological systems
- A unified and composable framework for modeling packed-bed liquid chromatography
- Multitask Interactions in Recurrent Dynamics across 100 Cognitive Tasks
- Debate, Not Voting: Agentic Arbitration over Weak Optical Chemical Structure Recognition Models
- TGAge: A Phenotypic Aging Clock Based on Tabular Foundation Models and the Gompertz Law for Assisted Living Facility Residents
- An Exploratory Multiome Analysis of a BCG-Associated HSPC Signature: Trained-Immunity Marker in Blood and an Adverse Prognostic Association in Tumour
- Canonical residual physics-informed neural networks and algorithmic perturbation landscapes map cell-fate transitions in longitudinal H3K27M glioma
- Establishment of a cochlear lymphatic vascular network and immune surveillance system following cochlear implantation
- Decoding & manipulating human intercellular signaling via scalable cell-free protein synthesis
- Modeling and Detecting Downward Causation in Disease Transmission
- Matched Plasma and Tissue Proteomics Reveal the Selective Nature of Circulating Biomarkers of Human Aging
- The Sensitivity of 13C-Metabolic Flux Analysis to Biomass Composition Underscores the Need for Accurate Biomass Formulation in Escherichia coli
- Signal Associa: hot tumors elicit field-spanning NK cell coordination linked to their recruitment
- Inference and validation of causal genetic interactions in aging human fibroblasts
- Localis-REX: a general protocol for time-resolved spatiofunctional profiling in live cells and C. elegans
- SMAD3-driven cell state transitions underpin immunoresistance in bladder cancer
- Computational modeling of breast cancer metastases predicts response to dual checkpoint inhibition and reveals spatially-informed treatments
- Evaluating the Acceptability of Lyme Disease Prevention Strategies in Ottawa, Canada: A Mixed-Methods Study
- Epidemiology and Antimicrobial Resistance of Klebsiella pneumoniae at a Tertiary Oncology Centre in Astana, Kazakhstan, 2022-2026: A Prospective Longitudinal Surveillance Study
- Enterovirus D68 in Europe, 2025: continent-wide predominance of subclade A2/D and shift from pediatric to adult cases
- Inpatient Mortality and Risk Factors Among Hospitalized Medicare Beneficiaries Ages 65 and Older with COVID-19 Treated with COVID-19 Convalescent Plasma (CCP), During 2020-2021
- Understanding widening socio-economic inequities in cardiovascular disease mortality in the Netherlands: A mixed methods protocol
- Factors Associated with Stunting, Underweight, and Wasting Among Children Under Five in Bangladesh: Evidence from the MICS 2025 Survey
- Parental Dementia History is Associated with Peripheral Immune Aging Rather than Generalized Biological and Brain Age Acceleration in Midlife
- Predicting the impact of primaquine on Plasmodium falciparum transmission using multiscale modelling
- Malaria transmission modelling and conditional prevention allocation in Uganda
- Low-to-moderate dose ionizing radiation and cerebrovascular disease mortality in U.S. radiologic technologists, 1983-2021
- Feed has no items.
- What is the future of genomic foundation models in biological research?
- CAR T cells from code to clinic: Framing modeling approaches with current translational research goals
- Sampling protein language models for functional protein design
- Let there be multifunctionality: Uncovering the dynamical zoo of the AC-DC genetic circuit
- High-throughput cell-free profiling of SARS-CoV-2 RBD variants enables rapid and quantitative in vitro affinity landscape mapping
- Local growth laws determine global shape of molluscan shells
- Learning dissipative chaotic dynamics with boundedness guarantees
- Taylor’s law beyond finite moments: A route to dynamic financial risk
- Generalized Taylor’s law for infinite-mean heavy-tailed data under dependence and heterogeneity
- Mathematical discovery and exploration can be done at scale
- Model topology determines parameter accessibility in Markov models of voltage-gated ion channels
- Evolution of teaching under the incomplete chance of vertical cultural transmission
- Modeling the influence of questing behavior and host accessibility on tick population dynamics
- Optimal scheduling of dengue vector control
- Stationary analysis of adaptive aspiration dynamics in graph-structured games
- A mechanistic learning framework for breast cancer relapse prediction
- A modified predator-prey model involving dual time delays: Bifurcation mechanism and controller design
- A degenerate Fokker-Planck stochastic modeling and simulation of the signaling pathways in esophageal cancer
- Coherent dynamical analysis arising from a stage-structured predator-prey model in a chemostat
- Parkinson’s disease, Gaucher disease, and bistability in the lysosomal degradation pathway
- Calsequestrin localization at RyR2 clusters enables calcium wave propagation in ventricular myocytes
- An integrative computational approach for obstacle avoidance during action selection
- Thirteen quick tips for bacteriophage genome annotation
- Visuomotor coordination on the road: Low-dimensional representations reveal adaptive, context-dependent reductions in the dimensionality of natural driving behavior
- A computational framework for modeling fluid and solid stressesin porous tissues with application to the trabeculated embryonic heart
- Feed has no items.
- Feed has no items.
- Feed has no items.
- Next-generation metabolic models: From multi-constraint integration to AI-driven whole-cell kinetic simulation
- Unleashing the potential of whole-cell modelling one step at a time
- The evolution of standards in systems biology: From metabolic and multi-scale to whole-cell models
- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
- Feed has no items.