Model Board
Each subheading shows the most recent computational models published in each journal or preprint server. As journals publish, this page is autonomously updated and clicking the links will send you to the article.
- Descriptive power and predictive limits of a discrete Hasimoto--DNLS model of protein backbone structure
- Reading Without a Reader: Large Language Models Collapse Reading and Writing into a Single Entangled Code
- Using Theory of Mind to Arbitrate between Social and Non-social Learning
- KAISEN: Reproducible Subgroup Fairness Auditing for Clinical Risk Models
- IndelFreeAligner: A Streaming Aligner for Comprehensive Gapless Alignment Against Terabase-Scale References
- ZUNA1.1: A more flexible EEG foundation model for Denoising and Super-resolution
- Hash Chemistry: Minimal Models for Evolutionary Growth of Complexity
- Operator splitting for exploiting linear-rate closure in solving infinite ODE hierarchies
- A data-driven stage-structured host-parasitoid model for optimizing Trichogramma interventions against soybean pod borer (Leguminivora glycinivorella) outbreaks
- Stimulus-Evoked Network Dynamics in Human Cortical Organoids: From a Graph-Computational Framework to Repeated-Stimulation Depression
- A genetic switch involving EGR1 and EZH2 links aging and development across human tissues
- A Bayesian Study to Optimally Unveil LDH Kinetic Mechanisms In Vivo
- Anticodon nucleotide modifications affect translational tuning by the ribosomal CAR surface
- Modulation of noisy gene expression by general sequestration mechanisms
- Dynamics of a Hes1-Dll1 regulatory network in coupled muscle stem cells: stability, bifurcations, and coexistence of oscillatory states
- The latent simplicity of microbial ecological interactions
- Exosome-Derived Proteomic Signatures Highlight Pathogenic Mechanisms in Moyamoya Disease
- Coordinated immune, chloroplast and chemical defences underpin multilayered resistance to barley yellow dwarf virus and its aphid vector associated with the Hordeum bulbosum-derived Ryd4 introgression in barley
- Light-dependent metabolism and proteome allocation in Synechocystis sp. PCC 6803: an enzyme-constrained metabolic model across light intensities
- Covariant Biochemical Systems Theory: cBST1~cBST3 Descriptors and Quantitative Validation
- What does a health-zone case-fatality ratio measure during an active outbreak? Reported mortality, mapped health-facility context, and case-death reporting heterogeneity in the 2026 Bundibugyo virus disease epidemic in DR Congo
- Investigating pathways of vancomycin-resistant Enterococcus (VRE) contamination and transmission in intensive care units: a prospective genomic surveillance study
- Depressive symptoms and incident osteoporosis: Findings from a 20-year follow up of the English Longitudinal Study of Ageing
- SymPerturb converts symptom-network structure into testable intervention priorities
- Treatment-Structured Modeling of Tuberculosis Transmission with Threshold Dynamics, Stability Analysis and Implications for Disease Control
- Incidence of bacterial sexually transmitted infections and associated factors in men who have sex with men: results from the ANRS 12 400/DepIST-H cohort
- How Predictable Was the 2026 Bundibugyo Virus Disease Outbreak? A Rolling-Origin Evaluation of Short-Term Forecast Models, an Empirically Recalibrated Bayesian Model, and a Data-Driven Baseline-Bayesian Ensemble, Using Daily Surveillance Data
- Cumulative exposure to risk factors and subsequent cardiovascular disease events: The Jackson Heart Study
- The Role of Sick-Quitter Bias in the Association Between Alcohol Use and Anxiety and Depression Symptoms: A Causal Analysis in a U.S. National Cohort
- Quantifying drug-related problems in community pharmacy practice: A pharmacoepidemiological study from Greece
- Inference of secreted protein signaling activities in intercellular communication
- SpatialFormer: universal spatial representation learning from subcellular molecular to multicellular landscapes
- Author Correction: Sleep chart of biological ageing clocks in middle and late life
- Spatialproteomics: an interoperable toolbox for analyzing highly multiplexed fluorescence image data
- Pathology-CoT: learning visual chain-of-thought agents from expert whole-slide image diagnosis behaviour
- RIG-Ing the system to balance immune activation and inflammatory tissue damage in the airways
- Programmable regenerative tissues: Converging mammalian synthetic biology and tissue engineering
- The molecular landscape of cellular metal ion biology
- BulkFormer: A large-scale foundation model for bulk transcriptomes
- Quantitative cytokine profiling of primary human macrophages reveals distinct single-cell modes of trained immunity
- Reply to Szöllősi and Williams: The observation threshold mitigates the bias of transient genes on ancestral reconstruction
- Ancestral gene content estimates under gain–loss–duplication depend on the chosen observation threshold
- Measurement accuracy in mechanobiology: A unifying statistical framework for testing cellular forces
- Hazard curvature makes within-host variability costly for survival
- Correction for Patel, The simplicity of the Hodge bundle
- A comparison of alternative vaccination strategies for protecting those vulnerable to illness, hospitalization, or death upon infection with SARS-CoV-2
- Evolution of quantitative traits: Exploring the ecological, social and genetic bases of adaptive polymorphism
- Directed cell migration from protrusion-adhesion coupling under local chemotactic regulation
- Integrated tick management strategies in fragmented peridomestic environments
- The male-biased sex ratio in humans and its role in the transition from promiscuity to pair bonding
- Seasonal impacts on brucellosis transmission mediated by live sheep supply-demand dynamics
- Worker allocation between defence and non-defence tasks in social insect colonies: Thresholds and stable configurations
- Anticipating critical transitions in fear-mediated mutualistic ecological system: Effects of stochasticity and early warning signals
- Dynamics of discrete-time competition models with interspecific mating and reproductive interference
- Fire-driven tick-host dynamics and their impact on tick-borne disease spread
- A parallel dual-stream state-space module for reliable and efficient biomedical relation extraction
- Assessing scale and predictive diversity in models for single-cell transcriptomics based on Geneformer
- Computational insights on the interplay between electrotaxis and mechanotaxis
- Quantitative modelling of P-TEFb mediated CTD phosphorylation identifies local cooperativity
- In silico clinical trials of BiTE expression by oncolytic viruses reveal the impact of patient heterogeneity on dosage protocol
- Assessing the Role of Model Complexity in Virtual Clinical Trial Outcomes
- When Strain Meets Stress: Threshold Dynamics and Regime Shifts in Wolbachia-Based Mosquito Population Replacement
- Mathematical Modeling of Systemic Sclerosis and Its Treatment
- Multiscale Analysis of a Kinetic Equation for Mechanotaxis
- Mathematical Modelling of the Mitochondrial Dicarboxylate Carrier (SLC25A10)
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- Next-generation metabolic models: Nonlinear resource allocation beyond the proteome
- Driving biological insight from genome-scale and multiscale to whole-cell modeling
- A dialog between cell adhesion and topology at the core of morphogenesis
- Computational models of cellular bioenergetics indicate the role of Ca2+-regulated pyruvate dehydrogenase in metabolic remodeling
- Dynamics of cell fate patterning in discrete multicellular systems
- Entrance saturation as a control point for recruitment robustness in social insect colonies
- An HIV–TB co-infection model: analysis and data-driven insights for China
- Genome rearrangements as double coset Markov chains
- A Degenerate Bifurcation Perspective on High Sensitivity in a Modified Leslie-Gower Model with Additive Allee Effect
- Taking into account the influence of climatic factors and age in the mathematical modeling and analysis of the dynamic transmission of malaria